RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 SGMS1Q86VZ5 419 aa18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 GTF3C2Q8WUA4 911 aaPredicted RBP18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 ZFYVE28Q9HCC9 887 aa18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 RNF186Q9NXI6 227 aa18.19■□□□□ 0.5
PRPF38B-202ENST00000370022 CCDC69A6NI79 296 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 PDHBP11177 359 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 COG2Q14746 738 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 FAM83BQ5T0W9 1011 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 IL27Q8NEV9 243 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 ASCC2Q9H1I8 757 aaPredicted RBP18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 MYPNQ86TC9 1320 aa18.18■□□□□ 0.5
PRPF38B-202ENST00000370022 DDAH1O94760 285 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 CPA1P15085 419 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 GPATCH4Q5T3I0 446 aaKnown RBP18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 SMCR8Q8TEV9 937 aaPredicted RBP18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 TCEANC2Q96MN5 208 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 LRRC2Q9BYS8 371 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 AGXT2Q9BYV1 514 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 FEM1BQ9UK73 627 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 PLA2G6O60733 806 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 TRPA1O75762 1119 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 FLOT1O75955 427 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 CALM1P0DP23 149 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 CALM2P0DP24 149 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 CALM3P0DP25 149 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 SYNE3Q6ZMZ3 975 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 Q6ZUG5 572 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 MAP3K14Q99558 947 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 PDRG1Q9NUG6 133 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 SLC12A7Q9Y666 1083 aa18.17■□□□□ 0.5
PRPF38B-202ENST00000370022 TLR2O60603 784 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 CYP2C8P10632 490 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 GCLCP48506 637 aaPredicted RBP18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 STAT2P52630 851 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 ZNF543Q08ER8 600 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 TROAPQ12815 778 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 CRHR2Q13324 411 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 ASPRV1Q53RT3 343 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 FAM160B2Q86V87 743 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 ZNF654Q8IZM8 581 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 CHURC1Q8WUH1 139 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 SENP2Q9HC62 589 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 MTMR7Q9Y216 660 aa18.16■□□□□ 0.5
PRPF38B-202ENST00000370022 DSG3P32926 999 aa18.15■□□□□ 0.5
PRPF38B-202ENST00000370022 RCAN1P53805 252 aa18.15■□□□□ 0.5
PRPF38B-202ENST00000370022 HERVK_113P62684 666 aa18.15■□□□□ 0.5
PRPF38B-202ENST00000370022 ANKRD1Q15327 319 aa18.15■□□□□ 0.5
PRPF38B-202ENST00000370022 PRPF38AQ8NAV1 312 aaKnown RBP18.15■□□□□ 0.5
PRPF38B-202ENST00000370022 P2RX7Q99572 595 aaKnown RBP18.15■□□□□ 0.5
PRPF38B-202ENST00000370022 SLF1Q9BQI6 1058 aa18.15■□□□□ 0.5
PRPF38B-202ENST00000370022 TMEM232C9JQI7 657 aa18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 KCTD1Q719H9 257 aa18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 MB21D1Q8N884 522 aa18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 BRF1Q92994 677 aa18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 PPP1R9AQ9ULJ8 1098 aa18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 ISY1Q9ULR0 285 aaKnown RBP18.14■□□□□ 0.49
PRPF38B-202ENST00000370022 ADGRA2Q96PE1 1338 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 SPDYE16A6NNV3 312 aaPredicted RBP18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 FDX1P10109 184 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 KIF5BP33176 963 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 EVCP57679 992 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 GRM4Q14833 912 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 BTNL9Q6UXG8 535 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 KIF2CQ99661 725 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 FRMPD2Q68DX3 1309 aaPredicted RBP18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 TBC1D8O95759 1140 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 NEK4P51957 841 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 IKQ13123 557 aaPredicted RBP18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 RABEP1Q15276 862 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 ADAMTS5Q9UNA0 930 aa18.13■□□□□ 0.49
PRPF38B-202ENST00000370022 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 PALM3A6NDB9 673 aaPredicted RBP18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 ZBTB43O43298 467 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 TOB2Q14106 344 aaPredicted RBP18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 PPP2R5BQ15173 497 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 C17orf99Q6UX52 265 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 RASGRP2Q7LDG7 609 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 KIFC2Q96AC6 838 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 GPCPD1Q9NPB8 672 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 FBXO28Q9NVF7 368 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 BRPF3Q9ULD4 1205 aa18.12■□□□□ 0.49
PRPF38B-202ENST00000370022 RABGAP1Q9Y3P9 1069 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 889.5 ms