RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MAP3K5Q99683 1374 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 PPFIA2O75334 1257 aa17.64■□□□□ 0.42
COL18A1-203ENST00000359759 LRCH2Q5VUJ6 765 aa17.64■□□□□ 0.42
COL18A1-203ENST00000359759 C14orf93Q9H972 538 aaKnown RBP17.64■□□□□ 0.42
COL18A1-203ENST00000359759 KDM2BQ8NHM5 1336 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 STAM2O75886 525 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 RCN2Q14257 317 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 MAIP1Q8WWC4 291 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 TRIM56Q9BRZ2 755 aaKnown RBP17.64■□□□□ 0.41
COL18A1-203ENST00000359759 SMYD2Q9NRG4 433 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 LMBRD1Q9NUN5 540 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 PFDN1O60925 122 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 CERS3Q8IU89 383 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 CCT5P48643 541 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 ZNF445P59923 1031 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 PHEXP78562 749 aa17.64■□□□□ 0.41
COL18A1-203ENST00000359759 HIBADHP31937 336 aaKnown RBP17.63■□□□□ 0.41
COL18A1-203ENST00000359759 SPOUT1Q5T280 376 aaKnown RBP17.63■□□□□ 0.41
COL18A1-203ENST00000359759 LRGUKQ96M69 825 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 Q9H521 79 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 ANLNQ9NQW6 1124 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 BRD3Q15059 726 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 TSTA3Q13630 321 aaPredicted RBP17.63■□□□□ 0.41
COL18A1-203ENST00000359759 DDB1Q16531 1140 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 TRIM50Q86XT4 487 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 PDE11AQ9HCR9 933 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 RIC8AQ9NPQ8 531 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 PPP2R2CQ9Y2T4 447 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 SYNJ2BP-COX16A0A087WUM0 186 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 AZI2Q9H6S1 392 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 COX16Q9P0S2 106 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 SBNO1A3KN83 1393 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 SEC31AO94979 1220 aaKnown RBP17.63■□□□□ 0.41
COL18A1-203ENST00000359759 EYA3Q99504 573 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 NR1I2O75469 434 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 PUM3Q15397 648 aaKnown RBP17.63■□□□□ 0.41
COL18A1-203ENST00000359759 HDAC11Q96DB2 347 aa17.63■□□□□ 0.41
COL18A1-203ENST00000359759 YARSP54577 528 aaKnown RBP17.62■□□□□ 0.41
COL18A1-203ENST00000359759 TMTC4Q5T4D3 741 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 KRT25Q7Z3Z0 450 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 ABTB1Q969K4 478 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-203ENST00000359759 HYOU1Q9Y4L1 999 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 FAN1Q9Y2M0 1017 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-203ENST00000359759 POC1B-GALNT4F8VUJ3 575 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 E2F5Q15329 346 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 TMEM63CQ9P1W3 806 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 ESYT2A0FGR8 921 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 TRIM58Q8NG06 486 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 SKA2Q8WVK7 121 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-203ENST00000359759 MAGED2Q9UNF1 606 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-203ENST00000359759 APOEP02649 317 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 TECP42680 631 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 IFNAR2P48551 515 aa17.62■□□□□ 0.41
COL18A1-203ENST00000359759 KAT6BQ8WYB5 2073 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 TTBK2Q6IQ55 1244 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 GPBP1Q86WP2 473 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 METTL13Q8N6R0 699 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 GRK7Q8WTQ7 553 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 CCDC24Q8N4L8 307 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 BANK1Q8NDB2 785 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 HOMER3Q9NSC5 361 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 PLCH2O75038 1416 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 AP1ARQ63HQ0 302 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 LRRC8CQ8TDW0 803 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 MAD1L1Q9Y6D9 718 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 ZBTB7BO15156 539 aaPredicted RBP17.61■□□□□ 0.41
COL18A1-203ENST00000359759 SLC1A4P43007 532 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 CHMP6Q96FZ7 201 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 ATF2P15336 505 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 HP1BP3Q5SSJ5 553 aaPredicted RBP17.61■□□□□ 0.41
COL18A1-203ENST00000359759 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 SDCCAG3Q96C92 435 aa17.61■□□□□ 0.41
COL18A1-203ENST00000359759 STAT1P42224 750 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 GOLGA8FQ08AF8 430 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 GOLGA8DPQ0D2H9 430 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 PLCB4Q15147 1175 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 MMS19Q96T76 1030 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 MYCBPQ99417 103 aaPredicted RBP17.6■□□□□ 0.41
COL18A1-203ENST00000359759 NCAPGQ9BPX3 1015 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 FRMPD2Q68DX3 1309 aaPredicted RBP17.6■□□□□ 0.41
COL18A1-203ENST00000359759 ECE1P42892 770 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 POLR2FP61218 127 aaKnown RBP17.6■□□□□ 0.41
COL18A1-203ENST00000359759 FOXD4Q12950 439 aaPredicted RBP17.6■□□□□ 0.41
COL18A1-203ENST00000359759 ZNF827Q17R98 1081 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 NSMFQ6X4W1 530 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 MAPKAPK5Q8IW41 473 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 TGFBRAP1Q8WUH2 860 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 GNPATO15228 680 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 OATP04181 439 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 IL2RBP14784 551 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 PFKFB1P16118 471 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 SLC8A1P32418 973 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 NME8Q8N427 588 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 APPBP2Q92624 585 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 NUB1Q9Y5A7 615 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 KDRP35968 1356 aa17.6■□□□□ 0.41
COL18A1-203ENST00000359759 BAG5Q9UL15 447 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms