RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 FANCCQ00597 558 aa17.75■□□□□ 0.43
MBD1-205ENST00000353909 TRMT44Q8IYL2 757 aaKnown RBP17.75■□□□□ 0.43
MBD1-205ENST00000353909 ZNF622Q969S3 477 aaKnown RBP eCLIP17.75■□□□□ 0.435e-7■■■□□ 14.6
MBD1-205ENST00000353909 DBNDD1Q9H9R9 158 aa17.75■□□□□ 0.43
MBD1-205ENST00000353909 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
MBD1-205ENST00000353909 PCDHAC2Q9Y5I4 1007 aa17.75■□□□□ 0.43
MBD1-205ENST00000353909 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
MBD1-205ENST00000353909 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
MBD1-205ENST00000353909 NT5DC1Q5TFE4 455 aa17.75■□□□□ 0.43
MBD1-205ENST00000353909 HOMER1Q86YM7 354 aa17.75■□□□□ 0.43
MBD1-205ENST00000353909 SMARCE1Q969G3 411 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 VAT1LQ9HCJ6 419 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 PCDHA4Q9UN74 947 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 UTRNP46939 3433 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 USP27XA6NNY8 438 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 M0R2N6 131 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 TMC6Q7Z403 805 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 SLF2Q8IX21 1173 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 FERMT2Q96AC1 680 aa17.74■□□□□ 0.43
MBD1-205ENST00000353909 STXBP3O00186 592 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 CCZ1BP86790 482 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 CCZ1P86791 482 aaPredicted RBP17.73■□□□□ 0.43
MBD1-205ENST00000353909 MORC3Q14149 939 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 ELOA2Q8IYF1 753 aaPredicted RBP17.73■□□□□ 0.43
MBD1-205ENST00000353909 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 ZNF287Q9HBT7 754 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 PARP3Q9Y6F1 533 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 USP17L5A8MUK1 530 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 SKILP12757 684 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 CERS3Q8IU89 383 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 PAGE5Q96GU1 130 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 C16orf45Q96MC5 204 aaPredicted RBP17.73■□□□□ 0.43
MBD1-205ENST00000353909 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
MBD1-205ENST00000353909 TPM2P07951 284 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 AKR1B1P15121 316 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 NFIAQ12857 509 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 INF2Q27J81 1249 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
MBD1-205ENST00000353909 C4orf32Q8N8J7 132 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 SPATA20Q8TB22 786 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 USP40Q9NVE5 1235 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 BARHL2Q9NY43 387 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 SLFN14P0C7P3 912 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 CALML3P27482 149 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 GNAQP50148 359 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 CCDC178Q5BJE1 867 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 ARMCX5Q6P1M9 558 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 LRRC47Q8N1G4 583 aaKnown RBP17.72■□□□□ 0.43
MBD1-205ENST00000353909 TSC1Q92574 1164 aa17.72■□□□□ 0.43
MBD1-205ENST00000353909 HOOK1Q9UJC3 728 aaKnown RBP17.72■□□□□ 0.43
MBD1-205ENST00000353909 MORC2Q9Y6X9 1032 aaPredicted RBP17.72■□□□□ 0.43
MBD1-205ENST00000353909 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.43
MBD1-205ENST00000353909 TMEM232C9JQI7 657 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 PDE6BP35913 854 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 TERF1P54274 439 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 CACNB3P54284 484 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 GABPAQ06546 454 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 ZFPM1Q8IX07 1006 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 SMYD4Q8IYR2 804 aaPredicted RBP17.71■□□□□ 0.43
MBD1-205ENST00000353909 MASTLQ96GX5 879 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 TMEM60Q9H2L4 133 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 FOCADQ5VW36 1801 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 PARP1P09874 1014 aaKnown RBP17.71■□□□□ 0.43
MBD1-205ENST00000353909 TPM4P67936 248 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 CDC42EP5Q6NZY7 148 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 SH3RF1Q7Z6J0 888 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 MTRQ99707 1265 aa17.71■□□□□ 0.43
MBD1-205ENST00000353909 BMP15O95972 392 aa17.71■□□□□ 0.42
MBD1-205ENST00000353909 SERPINC1P01008 464 aa17.71■□□□□ 0.42
MBD1-205ENST00000353909 TRAPPC10P48553 1259 aa17.71■□□□□ 0.42
MBD1-205ENST00000353909 UBASH3AP57075 661 aa17.71■□□□□ 0.42
MBD1-205ENST00000353909 APOBEC3HQ6NTF7 200 aaKnown RBP17.71■□□□□ 0.42
MBD1-205ENST00000353909 PIGSQ96S52 555 aa17.71■□□□□ 0.42
MBD1-205ENST00000353909 OSBPL5Q9H0X9 879 aaPredicted RBP17.71■□□□□ 0.42
MBD1-205ENST00000353909 BLZF1Q9H2G9 400 aa17.71■□□□□ 0.42
MBD1-205ENST00000353909 PP2D1A8MPX8 630 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 TOP1P11387 765 aaKnown RBP17.7■□□□□ 0.42
MBD1-205ENST00000353909 CD44P16070 742 aaKnown RBP17.7■□□□□ 0.42
MBD1-205ENST00000353909 CHRNA5P30532 468 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 E2F4Q16254 413 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 INTS13Q9NVM9 706 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 NFE2L3Q9Y4A8 694 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 CCDC194A0A1B0GVG4 234 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 G3V3G9 751 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 NT5C2P49902 561 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 DCAF8Q5TAQ9 597 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 KIAA0825Q8IV33 1275 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 MTMR4Q9NYA4 1195 aa17.7■□□□□ 0.42
MBD1-205ENST00000353909 GOLGA8FQ08AF8 430 aa17.69■□□□□ 0.42
MBD1-205ENST00000353909 GOLGA8DPQ0D2H9 430 aa17.69■□□□□ 0.42
MBD1-205ENST00000353909 CFAP100Q494V2 611 aa17.69■□□□□ 0.42
MBD1-205ENST00000353909 KANK3Q6NY19 840 aa17.69■□□□□ 0.42
MBD1-205ENST00000353909 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
MBD1-205ENST00000353909 FAM196BA6NMK8 535 aa17.69■□□□□ 0.42
MBD1-205ENST00000353909 COBLO75128 1261 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms