RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC9C1Q4G0N8 1177 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 ARHGEF18Q6ZSZ5 1173 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CCDC80Q76M96 950 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 MICU3Q86XE3 530 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 TMX3Q96JJ7 454 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 MYO1AQ9UBC5 1043 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 INTUQ9ULD6 942 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 ARHGAP26Q9UNA1 814 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 EPHB4P54760 987 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 SLC12A2P55011 1212 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 SFSWAPQ12872 951 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 G3BP2Q9UN86 482 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 ASXL1Q8IXJ9 1541 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 SYCP2Q9BX26 1530 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 DIAPH2O60879 1101 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 FAM13AO94988 1023 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 CEP78Q5JTW2 689 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 HDGFL1Q5TGJ6 251 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 IBTKQ9P2D0 1353 aaPredicted RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 HEATR5AQ86XA9 2040 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 KRT6AP02538 564 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 KRT6BP04259 564 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 EPB41P11171 864 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 KRT6CP48668 564 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 COPB1P53618 953 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 EVA1CP58658 441 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 OLFML2BQ68BL8 750 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 UBE3BQ7Z3V4 1068 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 TERB1Q8NA31 727 aa6.75□□□□□ -1.33
VCAN-203ENST00000343200 MRPL40Q9NQ50 206 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 INTS9Q9NV88 658 aaKnown RBP6.75□□□□□ -1.33
VCAN-203ENST00000343200 AATFQ9NY61 560 aaKnown RBP eCLIP6.75□□□□□ -1.33
VCAN-203ENST00000343200 H3BRJ5 948 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 GNGT2O14610 69 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ADCY3O60266 1144 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 EFCAB14O75071 495 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 GSTA1P08263 222 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 GSTA2P09210 222 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 IARSP41252 1262 aaKnown RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 CNGA2Q16280 664 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ATAD3BQ5T9A4 648 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TRIM59Q8IWR1 403 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.74□□□□□ -1.33
VCAN-203ENST00000343200 PTPRCP08575 1304 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ARHGAP5Q13017 1502 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 KLC1Q07866 573 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 RPS6KA1Q15418 735 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 KAZNQ674X7 775 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 MAIP1Q8WWC4 291 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 CCDC51Q96ER9 411 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 KLC4Q9NSK0 619 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 CASZ1Q86V15 1759 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 CCDC78A2IDD5 438 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TSPY2A6NKD2 308 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 H0Y626 953 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TRIM16O95361 564 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TSPY3P0CV98 308 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TSPY8P0CW00 308 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TSPY1Q01534 308 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ADCK1Q86TW2 530 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 NCAPG2Q86XI2 1143 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ZKSCAN3Q9BRR0 538 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TEX12Q9BXU0 123 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 RHBDL2Q9NX52 303 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TRAK1Q9UPV9 953 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 PASKQ96RG2 1323 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 FAM186AA6NE01 2351 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ESYT2A0FGR8 921 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ZNF213O14771 459 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 NECAB1Q8N987 351 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TUBGCP3Q96CW5 907 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 NDE1Q9NXR1 346 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TTI1O43156 1089 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 S100A9P06702 114 aaKnown RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 ZBED2Q9BTP6 218 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TRIM31Q9BZY9 425 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 CDV3Q9UKY7 258 aaKnown RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 CAPN11Q9UMQ6 739 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 NR1D1P20393 614 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 GUCY1B3Q02153 619 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 FSCBQ5H9T9 825 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 TRMT10CQ7L0Y3 403 aaKnown RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 C17orf53Q8N3J3 647 aaPredicted RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 KIF17Q9P2E2 1029 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ZNF215Q9UL58 517 aaPredicted RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 SLC4A1P02730 911 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 CCDC84Q86UT8 332 aaPredicted RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 ST13P5Q8NFI4 369 aaPredicted RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 TSR2Q969E8 191 aaKnown RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 WARS2Q9UGM6 360 aaKnown RBP6.74□□□□□ -1.33
VCAN-203ENST00000343200 PPME1Q9Y570 386 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 SDK1Q7Z5N4 2213 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 ZNF407Q9C0G0 2248 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 AKAP11Q9UKA4 1901 aa6.74□□□□□ -1.33
VCAN-203ENST00000343200 PDE6AP16499 860 aa6.73□□□□□ -1.33
VCAN-203ENST00000343200 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
VCAN-203ENST00000343200 DMPKQ09013 629 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms