RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 C9orf131Q5VYM1 1079 aa4.87□□□□□ -1.63
LRRC39-201ENST00000342895 SMARCC1Q92922 1105 aaPredicted RBP4.87□□□□□ -1.63
LRRC39-201ENST00000342895 SLC6A18Q96N87 628 aa4.87□□□□□ -1.63
LRRC39-201ENST00000342895 HDAC8Q9BY41 377 aa4.87□□□□□ -1.63
LRRC39-201ENST00000342895 TMEM59LQ9UK28 342 aa4.87□□□□□ -1.63
LRRC39-201ENST00000342895 CARMIL2Q6F5E8 1435 aa4.87□□□□□ -1.63
LRRC39-201ENST00000342895 SHISA3A0PJX4 238 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 WASH4PA8MWX3 477 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 PMS1P54277 932 aaKnown RBP4.86□□□□□ -1.63
LRRC39-201ENST00000342895 RNF111Q6ZNA4 994 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 ZNF655Q8N720 491 aaPredicted RBP4.86□□□□□ -1.63
LRRC39-201ENST00000342895 C19orf47Q8N9M1 422 aaKnown RBP4.86□□□□□ -1.63
LRRC39-201ENST00000342895 SLAMF8Q9P0V8 285 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 STRIP2Q9ULQ0 834 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 PPT2Q9UMR5 302 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 EFR3BQ9Y2G0 817 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 PCDHA11Q9Y5I1 949 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 SIGLEC6O43699 453 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 GIPRP48546 466 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 EGR3Q06889 387 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 ANKRD39Q53RE8 183 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 ZSWIM9Q86XI8 627 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 FAM168AQ92567 244 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 DHX38Q92620 1227 aaKnown RBP4.86□□□□□ -1.63
LRRC39-201ENST00000342895 SLC12A7Q9Y666 1083 aa4.86□□□□□ -1.63
LRRC39-201ENST00000342895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
LRRC39-201ENST00000342895 DNAJC25-GNG10A0A024R161 153 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 HPXP02790 462 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 TCF3P15923 654 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 LTKP29376 864 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 EIF6P56537 245 aaKnown RBP4.85□□□□□ -1.63
LRRC39-201ENST00000342895 TEKQ02763 1124 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 BBS9Q3SYG4 887 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 RALGPS1Q5JS13 557 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 PDZD8Q8NEN9 1154 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 CRBNQ96SW2 442 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 SRRTQ9BXP5 876 aaKnown RBP4.85□□□□□ -1.63
LRRC39-201ENST00000342895 PRDM14Q9GZV8 571 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 ACBD3Q9H3P7 528 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 CCSER2Q9H7U1 834 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 FAM53CQ9NYF3 392 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 PCDHB12Q9Y5F1 795 aa4.85□□□□□ -1.63
LRRC39-201ENST00000342895 RAC2P15153 192 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 AUHQ13825 339 aaKnown RBP4.84□□□□□ -1.63
LRRC39-201ENST00000342895 NR0B2Q15466 257 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 TAF7LQ5H9L4 462 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 FBXW10Q5XX13 1052 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-201ENST00000342895 UNC5AQ6ZN44 842 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 TTC6Q86TZ1 520 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 C7orf61Q8IZ16 206 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 USHBP1Q8N6Y0 703 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 POU5F2Q8N7G0 328 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 LINC00116Q8NCU8 138 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 TCTN2Q96GX1 697 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 KIRREL1Q96J84 757 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 MKRN2Q9H000 416 aaKnown RBP4.84□□□□□ -1.63
LRRC39-201ENST00000342895 CDK11AQ9UQ88 783 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-201ENST00000342895 INPP5FQ9Y2H2 1132 aa4.84□□□□□ -1.63
LRRC39-201ENST00000342895 GLI1P08151 1106 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 ZGLP1P0C6A0 271 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 ENDOUP21128 410 aaKnown RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 PCBP3P57721 371 aaKnown RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 DUSP4Q13115 394 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 SNW1Q13573 536 aaKnown RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 KCNMB1Q16558 191 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 TMC3Q7Z5M5 1100 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 LILRA2Q8N149 483 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 SYTL4Q96C24 671 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 SHDQ96IW2 340 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 ZNF512BQ96KM6 892 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 PKNOX2Q96KN3 472 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 ADAMTS10Q9H324 1103 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 ZNF214Q9UL59 606 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 PRAMEF1O95521 474 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 ERCC5P28715 1186 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 NASPP49321 788 aaPredicted RBP4.83□□□□□ -1.64
LRRC39-201ENST00000342895 CHRNEQ04844 493 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 OXR1Q8N573 874 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 SP110Q9HB58 689 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 CHST7Q9NS84 486 aa4.83□□□□□ -1.64
LRRC39-201ENST00000342895 FITM1A5D6W6 292 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 C9IYK1 514 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 SHOXO15266 292 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 ATF4P18848 351 aaPredicted RBP4.82□□□□□ -1.64
LRRC39-201ENST00000342895 CDK11BP21127 795 aaKnown RBP4.82□□□□□ -1.64
LRRC39-201ENST00000342895 CASP7P55210 303 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 ZYXQ15942 572 aaKnown RBP4.82□□□□□ -1.64
LRRC39-201ENST00000342895 FYB2Q5VWT5 728 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 CCDC81Q6ZN84 652 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 RUFY4Q6ZNE9 571 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 PPFIBP1Q86W92 1011 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 SPPL2CQ8IUH8 684 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 DHX37Q8IY37 1157 aaKnown RBP4.82□□□□□ -1.64
LRRC39-201ENST00000342895 CCDC144CPQ8IYA2 1237 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 ANKS4BQ8N8V4 417 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 LINC01599Q8WXQ3 324 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 PHAXQ9H814 394 aaKnown RBP4.82□□□□□ -1.64
LRRC39-201ENST00000342895 IGSF5Q9NSI5 407 aa4.82□□□□□ -1.64
LRRC39-201ENST00000342895 TCFL5Q9UL49 500 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms