RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ECE1P42892 770 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 KIF23Q02241 960 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 KLRC3Q07444 240 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 DLK2Q6UY11 383 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ACER1Q8TDN7 264 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 FZD1Q9UP38 647 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 KIF28PB7ZC32 967 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 MMP1P03956 469 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 XBP1P17861 261 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SLC1A4P43007 532 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SULF1Q8IWU6 871 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GMCL1P1Q8NEA9 526 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
CDK5RAP3-201ENST00000338399 POTECB2RU33 542 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 CTNND1O60716 968 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 NDUFB10O96000 172 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 INPP5BP32019 993 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 TAF1DQ9H5J8 278 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 RIOX1Q9H6W3 641 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SSC5DA1L4H1 1573 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 WDR90Q96KV7 1748 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 IQCA1LA6NCM1 817 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 RRP36Q96EU6 259 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 LMBRD1Q9NUN5 540 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 TFIP11Q9UBB9 837 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ZNF112Q9UJU3 913 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 DOCK1Q14185 1865 aa17.03■□□□□ 0.32
CDK5RAP3-201ENST00000338399 FIBPO43427 364 aa17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SLC16A2P36021 539 aa17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 KRT85P78386 507 aa17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GNL2Q13823 731 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GMCL1Q96IK5 515 aa17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 PIGSQ96S52 555 aa17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 WRNIP1Q96S55 665 aa17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 NUP88Q99567 741 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GLIS2Q9BZE0 524 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-201ENST00000338399 BTBD18B2RXH4 712 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PRKG1Q13976 671 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 BRAPQ7Z569 592 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 USP48Q86UV5 1035 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 DIS3L2Q8IYB7 885 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PHF20Q9BVI0 1012 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 GOPCQ9HD26 462 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PTMSP20962 102 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 ADGRF4Q8IZF3 695 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 ZKSCAN4Q969J2 545 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 JMJD4Q9H9V9 463 aa17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-201ENST00000338399 BMP3P12645 472 aa17■□□□□ 0.31
CDK5RAP3-201ENST00000338399 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.316e-7■■■□□ 18.2
CDK5RAP3-201ENST00000338399 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
CDK5RAP3-201ENST00000338399 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SCYL3Q8IZE3 742 aa17■□□□□ 0.31
CDK5RAP3-201ENST00000338399 OXER1Q8TDS5 423 aa17■□□□□ 0.31
CDK5RAP3-201ENST00000338399 KLRG1Q96E93 195 aa17■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SH2D4AQ9H788 454 aa17■□□□□ 0.31
CDK5RAP3-201ENST00000338399 NLRP5P59047 1200 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 MYSM1Q5VVJ2 828 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 FOXP1Q9H334 677 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 VCPKMTQ9H867 229 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SH3GLB2Q9NR46 395 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 USP17L10C9JJH3 530 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 TMEM232C9JQI7 657 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 STXBP3O00186 592 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 TRAK2O60296 914 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 USP2O75604 605 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 CEBPZQ03701 1054 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 NR5A1Q13285 461 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 TYW1BQ6NUM6 668 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 TMEM87AQ8NBN3 555 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 FEZ1Q99689 392 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 BARHL2Q9NY43 387 aa16.99■□□□□ 0.31
CDK5RAP3-201ENST00000338399 KRT2P35908 639 aa16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 IKQ13123 557 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms