RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ATRNO75882 1429 aa18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 KCNQ4P56696 695 aa18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 NELFBQ8WX92 580 aa18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 PHF20Q9BVI0 1012 aa18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 MFAP3LO75121 409 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 EVX2Q03828 476 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 PAK1Q13153 545 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 KRT31Q15323 416 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 SEC23AQ15436 765 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 PARP10Q53GL7 1025 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 MUM1L1Q5H9M0 696 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 GPKOWQ92917 476 aaPredicted RBP eCLIP18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 SASH3O75995 380 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 CALM1P0DP23 149 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 CALM2P0DP24 149 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 CALM3P0DP25 149 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 LONRF2Q1L5Z9 754 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 LEKR1Q6ZMV7 388 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 AK7Q96M32 723 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 TJP1Q07157 1748 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 PHACTR2O75167 634 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 ZRANB2O95218 330 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 EIF5P55010 431 aaKnown RBP18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 CEP112Q8N8E3 955 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 CCDC102AQ96A19 550 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 MCM9Q9NXL9 1143 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 GDAQ9Y2T3 454 aa18.59■□□□□ 0.57
CDC42EP4-201ENST00000335793 PLEKHG2Q9H7P9 1386 aa18.58■□□□□ 0.57
CDC42EP4-201ENST00000335793 CCDC194A0A1B0GVG4 234 aa18.58■□□□□ 0.57
CDC42EP4-201ENST00000335793 TBC1D8O95759 1140 aa18.58■□□□□ 0.57
CDC42EP4-201ENST00000335793 SRGAP1Q7Z6B7 1085 aa18.58■□□□□ 0.57
CDC42EP4-201ENST00000335793 ELOA2Q8IYF1 753 aaPredicted RBP18.58■□□□□ 0.57
CDC42EP4-201ENST00000335793 ERLIN1O75477 346 aa18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 UBA7P41226 1012 aa18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 DPYDQ12882 1025 aa18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 SMIM5Q71RC9 77 aa18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 SRBD1Q8N5C6 995 aaKnown RBP18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 NAA15Q9BXJ9 866 aaKnown RBP18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 MAGEC2Q9UBF1 373 aaPredicted RBP18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 CDC23Q9UJX2 597 aa18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 DCCP43146 1447 aa18.58■□□□□ 0.56
CDC42EP4-201ENST00000335793 CTAGE15A4D2H0 777 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 PPP1R3GB7ZBB8 358 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 CTAGE8P0CG41 777 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 CYP2D6P10635 497 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 PPP2R5AQ15172 486 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 CTAGE6Q86UF2 777 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 CTAGE4Q8IX94 777 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 KIFC2Q96AC6 838 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 KAT14Q9H8E8 782 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 ADAM21Q9UKJ8 722 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 KCNJ18B7U540 433 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 GYPCP04921 128 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 SCG2P13521 617 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 MNAT1P51948 309 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 TROAPQ12815 778 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 KCNJ12Q14500 433 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 WWC2Q6AWC2 1192 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 SHISA4Q96DD7 197 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 TRIM47Q96LD4 638 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 CRNKL1Q9BZJ0 848 aaKnown RBP18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 MKNK2Q9HBH9 465 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 ZNF652Q9Y2D9 606 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 LOC102724428A0A0B4J2F2 783 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 EIF3CLB5ME19 914 aaKnown RBP18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 IPO7O95373 1038 aaKnown RBP18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 COPB1P53618 953 aaKnown RBP18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 SIK1P57059 783 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 DDB1Q16531 1140 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 TMTC1Q8IUR5 882 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 EIF3CQ99613 913 aaKnown RBP18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
CDC42EP4-201ENST00000335793 TOM1O60784 492 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 HSP90B2PQ58FF3 399 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 TMTC3Q6ZXV5 915 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 MAP2K2P36507 400 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 SPAG1Q07617 926 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 ERFEQ4G0M1 354 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 NAPGQ99747 312 aaPredicted RBP18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 VPS18Q9P253 973 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 TTF2Q9UNY4 1162 aaKnown RBP18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 MYO5AQ9Y4I1 1855 aaKnown RBP18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 PKD1L3Q7Z443 1732 aa18.56■□□□□ 0.56
CDC42EP4-201ENST00000335793 TRIM49BA6NDI0 452 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 ENC1O14682 589 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 ABL1P00519 1130 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 USP5P45974 858 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 CERKQ8TCT0 537 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 ECM2O94769 699 aaPredicted RBP18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 STIM1Q13586 685 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 CYP26C1Q6V0L0 522 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 HEATR3Q7Z4Q2 680 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 CCDC91Q7Z6B0 441 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 KIAA1328Q86T90 577 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 DZIP1Q86YF9 867 aaKnown RBP18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 MICALL1Q8N3F8 863 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 RPN1P04843 607 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms