RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 NECAB1Q8N987 351 aa21.82■■□□□ 1.08
TSSC4-201ENST00000333256 BRI3BPQ8WY22 251 aa21.82■■□□□ 1.08
TSSC4-201ENST00000333256 LPAR1Q92633 364 aa21.82■■□□□ 1.08
TSSC4-201ENST00000333256 GMCL1Q96IK5 515 aa21.82■■□□□ 1.08
TSSC4-201ENST00000333256 CAPNS2Q96L46 248 aa21.82■■□□□ 1.08
TSSC4-201ENST00000333256 CPVLQ9H3G5 476 aa21.82■■□□□ 1.08
TSSC4-201ENST00000333256 DTNBO60941 627 aa21.81■■□□□ 1.08
TSSC4-201ENST00000333256 SNHG28P0DPA3 235 aa21.81■■□□□ 1.08
TSSC4-201ENST00000333256 BMP3P12645 472 aa21.81■■□□□ 1.08
TSSC4-201ENST00000333256 METAP2P50579 478 aaKnown RBP eCLIP21.81■■□□□ 1.08
TSSC4-201ENST00000333256 TTBK2Q6IQ55 1244 aa21.81■■□□□ 1.08
TSSC4-201ENST00000333256 SAMD1Q6SPF0 538 aaPredicted RBP21.81■■□□□ 1.08
TSSC4-201ENST00000333256 FANCBQ8NB91 859 aa21.81■■□□□ 1.08
TSSC4-201ENST00000333256 ZNF274Q96GC6 653 aaPredicted RBP21.81■■□□□ 1.08
TSSC4-201ENST00000333256 C12orf42Q96LP6 360 aa21.81■■□□□ 1.08
TSSC4-201ENST00000333256 RPAP3Q9H6T3 665 aaPredicted RBP21.81■■□□□ 1.08
TSSC4-201ENST00000333256 PARP1P09874 1014 aaKnown RBP21.8■■□□□ 1.08
TSSC4-201ENST00000333256 CALM1P0DP23 149 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 CALM2P0DP24 149 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 CALM3P0DP25 149 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 CETPP11597 493 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 CDC27P30260 824 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 ZNF543Q08ER8 600 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 GRM4Q14833 912 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
TSSC4-201ENST00000333256 CTCFLQ8NI51 663 aaPredicted RBP21.8■■□□□ 1.08
TSSC4-201ENST00000333256 DCAF4Q8WV16 495 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 TANGO6Q9C0B7 1094 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 SLKQ9H2G2 1235 aaPredicted RBP21.8■■□□□ 1.08
TSSC4-201ENST00000333256 MAD2L2Q9UI95 211 aa21.8■■□□□ 1.08
TSSC4-201ENST00000333256 TMEM232C9JQI7 657 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 WDR46O15213 610 aaKnown RBP21.79■■□□□ 1.08
TSSC4-201ENST00000333256 AOC2O75106 756 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 HSPA6P17066 643 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 ADD1P35611 737 aaKnown RBP21.79■■□□□ 1.08
TSSC4-201ENST00000333256 SLC16A2P36021 539 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 RTN1Q16799 776 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 FAM217BQ9NTX9 383 aaPredicted RBP21.79■■□□□ 1.08
TSSC4-201ENST00000333256 FBXO28Q9NVF7 368 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 PTPRFP10586 1907 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 PPFIA3O75145 1194 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 PLEKHA8P1O95397 391 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 IKQ13123 557 aaPredicted RBP21.79■■□□□ 1.08
TSSC4-201ENST00000333256 FASTKD5Q7L8L6 764 aaKnown RBP21.79■■□□□ 1.08
TSSC4-201ENST00000333256 CCDC82Q8N4S0 544 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 PROCA1Q8NCQ7 364 aaPredicted RBP21.79■■□□□ 1.08
TSSC4-201ENST00000333256 TMX3Q96JJ7 454 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 UBA5Q9GZZ9 404 aa21.79■■□□□ 1.08
TSSC4-201ENST00000333256 KIF23Q02241 960 aaPredicted RBP21.78■■□□□ 1.08
TSSC4-201ENST00000333256 SCRN1Q12765 414 aa21.78■■□□□ 1.08
TSSC4-201ENST00000333256 GPAT2Q6NUI2 795 aa21.78■■□□□ 1.08
TSSC4-201ENST00000333256 NBPF11Q86T75 865 aa21.78■■□□□ 1.08
TSSC4-201ENST00000333256 PTPN18Q99952 460 aa21.78■■□□□ 1.08
TSSC4-201ENST00000333256 PALM3A6NDB9 673 aaPredicted RBP21.77■■□□□ 1.08
TSSC4-201ENST00000333256 BTBD19C9JJ37 291 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 KLRF2D3W0D1 207 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 PFKFB2O60825 505 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 MCM2P49736 904 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 VEGFBP49765 207 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 ST3GAL1Q11201 340 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 ASPRV1Q53RT3 343 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 GPATCH4Q5T3I0 446 aaKnown RBP21.77■■□□□ 1.08
TSSC4-201ENST00000333256 IL27Q8NEV9 243 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 AGTPBP1Q9UPW5 1226 aa21.77■■□□□ 1.08
TSSC4-201ENST00000333256 RBM19Q9Y4C8 960 aaKnown RBP21.77■■□□□ 1.08
TSSC4-201ENST00000333256 MANSC4A6NHS7 340 aaPredicted RBP21.76■■□□□ 1.07
TSSC4-201ENST00000333256 KIF5BP33176 963 aa21.76■■□□□ 1.07
TSSC4-201ENST00000333256 RCAN1P53805 252 aa21.76■■□□□ 1.07
TSSC4-201ENST00000333256 CCDC83Q8IWF9 413 aa21.76■■□□□ 1.07
TSSC4-201ENST00000333256 FAM43AQ8N2R8 423 aa21.76■■□□□ 1.07
TSSC4-201ENST00000333256 SNX21Q969T3 373 aa21.76■■□□□ 1.07
TSSC4-201ENST00000333256 ZSCAN31Q96LW9 406 aaPredicted RBP21.76■■□□□ 1.07
TSSC4-201ENST00000333256 MAP3K14Q99558 947 aa21.76■■□□□ 1.07
TSSC4-201ENST00000333256 FLOT1O75955 427 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 NOGQ13253 232 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 SLC35G1Q2M3R5 365 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 HSCBQ8IWL3 235 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 GTF3C6Q969F1 213 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 WDR33Q9C0J8 1336 aaKnown RBP21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L15C9J2P7 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L13C9JLJ4 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L11C9JVI0 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L18D6R9N7 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L22D6RA61 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L17D6RBQ6 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L19D6RCP7 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L20D6RJB6 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 IGF2BP3O00425 579 aaKnown RBP eCLIP21.75■■□□□ 1.07
TSSC4-201ENST00000333256 STAT2P52630 851 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 USP17L24Q0WX57 530 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 CATSPERGQ6ZRH7 1159 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 TMTC3Q6ZXV5 915 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 SRBD1Q8N5C6 995 aaKnown RBP21.75■■□□□ 1.07
TSSC4-201ENST00000333256 PIBF1Q8WXW3 757 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 KIFC2Q96AC6 838 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 VAT1LQ9HCJ6 419 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 SH2B1Q9NRF2 756 aaPredicted RBP21.75■■□□□ 1.07
TSSC4-201ENST00000333256 LOC285556D6RIA3 1793 aa21.75■■□□□ 1.07
TSSC4-201ENST00000333256 K7ELQ4 463 aaPredicted RBP21.74■■□□□ 1.07
TSSC4-201ENST00000333256 PDHXO00330 501 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms