RNA–Protein interactions for RNA: ENST00000329608.10

CSF1-201, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-201ENST00000329608 FILIP1LQ4L180 1135 aa16.53■□□□□ 0.24
CSF1-201ENST00000329608 TYW1BQ6NUM6 668 aa16.53■□□□□ 0.24
CSF1-201ENST00000329608 DGKHQ86XP1 1220 aa16.53■□□□□ 0.24
CSF1-201ENST00000329608 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.24
CSF1-201ENST00000329608 CUL4BQ13620 913 aa16.52■□□□□ 0.24
CSF1-201ENST00000329608 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
CSF1-201ENST00000329608 VPS16Q9H269 839 aa16.52■□□□□ 0.24
CSF1-201ENST00000329608 GPCPD1Q9NPB8 672 aa16.52■□□□□ 0.24
CSF1-201ENST00000329608 MARCH6O60337 910 aa16.52■□□□□ 0.24
CSF1-201ENST00000329608 WWC2Q6AWC2 1192 aa16.52■□□□□ 0.24
CSF1-201ENST00000329608 ZNF622Q969S3 477 aaKnown RBP eCLIP16.52■□□□□ 0.24
CSF1-201ENST00000329608 BAG1Q99933 345 aaPredicted RBP16.52■□□□□ 0.24
CSF1-201ENST00000329608 POLLQ9UGP5 575 aa16.52■□□□□ 0.24
CSF1-201ENST00000329608 FAM237AA0A1B0GTK4 181 aa16.52■□□□□ 0.23
CSF1-201ENST00000329608 ATP2B4P23634 1241 aa16.52■□□□□ 0.23
CSF1-201ENST00000329608 TEX33O43247 280 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
CSF1-201ENST00000329608 PCDHA4Q9UN74 947 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
CSF1-201ENST00000329608 N4BP3O15049 544 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
CSF1-201ENST00000329608 RASA1P20936 1047 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 SPECC1LQ69YQ0 1117 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
CSF1-201ENST00000329608 ENOX1Q8TC92 643 aaKnown RBP16.51■□□□□ 0.23
CSF1-201ENST00000329608 C4AP0C0L4 1744 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 C4BP0C0L5 1744 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
CSF1-201ENST00000329608 NPY5RQ15761 445 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 CCDC148Q8NFR7 591 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
CSF1-201ENST00000329608 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
CSF1-201ENST00000329608 FGRP09769 529 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 RGS22Q8NE09 1264 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 TBC1D16Q8TBP0 767 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 TTF2Q9UNY4 1162 aaKnown RBP16.5■□□□□ 0.23
CSF1-201ENST00000329608 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 SLURP2P0DP57 97 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 GNG11P61952 73 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 MNS1Q8NEH6 495 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 RTFDC1Q9BY42 306 aaPredicted RBP16.5■□□□□ 0.23
CSF1-201ENST00000329608 INTS13Q9NVM9 706 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 TRPC5Q9UL62 973 aaPredicted RBP16.5■□□□□ 0.23
CSF1-201ENST00000329608 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
CSF1-201ENST00000329608 CYTH3O43739 400 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 HSPA1LP34931 641 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 NCBP1Q09161 790 aaKnown RBP16.49■□□□□ 0.23
CSF1-201ENST00000329608 TCP10Q12799 353 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 ANKRD20A12PQ8NF67 263 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
CSF1-201ENST00000329608 PIGSQ96S52 555 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 ELF2Q15723 593 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 TRIML1Q8N9V2 468 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 TAB2Q9NYJ8 693 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 TPM1P09493 284 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
CSF1-201ENST00000329608 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
CSF1-201ENST00000329608 SLF2Q8IX21 1173 aa16.49■□□□□ 0.23
CSF1-201ENST00000329608 NID2Q14112 1375 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 PLCG2P16885 1265 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
CSF1-201ENST00000329608 LZTFL1Q9NQ48 299 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 FLT1P17948 1338 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 USP17L5A8MUK1 530 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 CACNB3P54284 484 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 GRM4Q14833 912 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 NYAP1Q6ZVC0 841 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
CSF1-201ENST00000329608 SARSP49591 514 aaKnown RBP16.48■□□□□ 0.23
CSF1-201ENST00000329608 SPATA1Q5VX52 437 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 COA7Q96BR5 231 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 PCMTD1Q96MG8 357 aaPredicted RBP16.48■□□□□ 0.23
CSF1-201ENST00000329608 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
CSF1-201ENST00000329608 DDR1Q08345 913 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 IL17AQ16552 155 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 MYH15Q9Y2K3 1946 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 KIF2AO00139 706 aaPredicted RBP16.47■□□□□ 0.23
CSF1-201ENST00000329608 PPEF1O14829 653 aaPredicted RBP16.47■□□□□ 0.23
CSF1-201ENST00000329608 BBOX1O75936 387 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 TECP42680 631 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 TXKP42681 527 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 NELFBQ8WX92 580 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 TNFRSF25Q93038 417 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 MED15Q96RN5 788 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 FAM196BA6NMK8 535 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 ZSCAN12O43309 604 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 SLU7O95391 586 aaKnown RBP16.47■□□□□ 0.23
CSF1-201ENST00000329608 ERCC3P19447 782 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 DPYDQ12882 1025 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 NUP88Q99567 741 aaPredicted RBP16.47■□□□□ 0.23
CSF1-201ENST00000329608 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 USP40Q9NVE5 1235 aa16.47■□□□□ 0.23
CSF1-201ENST00000329608 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms