RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 DCPSQ96C86 337 aaKnown RBP26.02■■□□□ 1.76
IRF3-201ENST00000309877 ZNF396Q96N95 335 aaPredicted RBP26.02■■□□□ 1.76
IRF3-201ENST00000309877 UBA5Q9GZZ9 404 aa26.02■■□□□ 1.76
IRF3-201ENST00000309877 TRAK2O60296 914 aa26.01■■□□□ 1.75
IRF3-201ENST00000309877 SLC35G1Q2M3R5 365 aa26.01■■□□□ 1.75
IRF3-201ENST00000309877 SKOR2Q2VWA4 1001 aaPredicted RBP26.01■■□□□ 1.75
IRF3-201ENST00000309877 PRAMEF18Q5VWM3 479 aa26.01■■□□□ 1.75
IRF3-201ENST00000309877 RRP36Q96EU6 259 aaKnown RBP26.01■■□□□ 1.75
IRF3-201ENST00000309877 ZNF341Q9BYN7 854 aa26.01■■□□□ 1.75
IRF3-201ENST00000309877 CPVLQ9H3G5 476 aa26.01■■□□□ 1.75
IRF3-201ENST00000309877 VAT1LQ9HCJ6 419 aa26.01■■□□□ 1.75
IRF3-201ENST00000309877 KIF28PB7ZC32 967 aa26■■□□□ 1.75
IRF3-201ENST00000309877 F5H6K3 240 aa26■■□□□ 1.75
IRF3-201ENST00000309877 SLC1A4P43007 532 aa26■■□□□ 1.75
IRF3-201ENST00000309877 KLRC3Q07444 240 aa26■■□□□ 1.75
IRF3-201ENST00000309877 GINM1Q9NU53 330 aa26■■□□□ 1.75
IRF3-201ENST00000309877 TFIP11Q9UBB9 837 aaKnown RBP26■■□□□ 1.75
IRF3-201ENST00000309877 CFAP45Q9UL16 551 aa26■■□□□ 1.75
IRF3-201ENST00000309877 MYH4Q9Y623 1939 aa26■■□□□ 1.75
IRF3-201ENST00000309877 CTNND1O60716 968 aaKnown RBP25.99■■□□□ 1.75
IRF3-201ENST00000309877 ATL3Q6DD88 541 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 USP50Q70EL3 339 aaPredicted RBP25.99■■□□□ 1.75
IRF3-201ENST00000309877 KCTD1Q719H9 257 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 DIS3L2Q8IYB7 885 aaKnown RBP25.99■■□□□ 1.75
IRF3-201ENST00000309877 TMEM87AQ8NBN3 555 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 SCAND2PQ9GZW5 306 aaPredicted RBP25.99■■□□□ 1.75
IRF3-201ENST00000309877 SEC63Q9UGP8 760 aaKnown RBP25.99■■□□□ 1.75
IRF3-201ENST00000309877 EPHX2P34913 555 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 SUPT20HL1Q3ZLR7 823 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 PHF20Q9BVI0 1012 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 RIOX1Q9H6W3 641 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 SH2D4AQ9H788 454 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 BRMS1Q9HCU9 246 aa25.99■■□□□ 1.75
IRF3-201ENST00000309877 A0A1W2PRG0 241 aa25.98■■□□□ 1.75
IRF3-201ENST00000309877 U2AF2P26368 475 aaKnown RBP eCLIP25.98■■□□□ 1.751e-7■■■■■ 32.6
IRF3-201ENST00000309877 HOMER1Q86YM7 354 aa25.98■■□□□ 1.75
IRF3-201ENST00000309877 SULF1Q8IWU6 871 aa25.98■■□□□ 1.75
IRF3-201ENST00000309877 GMCL1Q96IK5 515 aa25.98■■□□□ 1.75
IRF3-201ENST00000309877 FOXP1Q9H334 677 aaPredicted RBP25.98■■□□□ 1.75
IRF3-201ENST00000309877 SH3GLB2Q9NR46 395 aa25.98■■□□□ 1.75
IRF3-201ENST00000309877 TMX2Q9Y320 296 aa25.98■■□□□ 1.75
IRF3-201ENST00000309877 MYH6P13533 1939 aa25.97■■□□□ 1.75
IRF3-201ENST00000309877 NDUFB10O96000 172 aa25.97■■□□□ 1.75
IRF3-201ENST00000309877 ECE1P42892 770 aa25.97■■□□□ 1.75
IRF3-201ENST00000309877 TTBK2Q6IQ55 1244 aa25.97■■□□□ 1.75
IRF3-201ENST00000309877 ACER1Q8TDN7 264 aa25.97■■□□□ 1.75
IRF3-201ENST00000309877 GOPCQ9HD26 462 aa25.97■■□□□ 1.75
IRF3-201ENST00000309877 BTBD18B2RXH4 712 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 NLRP5P59047 1200 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 MYSM1Q5VVJ2 828 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 HEATR3Q7Z4Q2 680 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 GPKOWQ92917 476 aaPredicted RBP eCLIP25.96■■□□□ 1.75
IRF3-201ENST00000309877 SPATA32Q96LK8 384 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 PIGSQ96S52 555 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.96■■□□□ 1.75
IRF3-201ENST00000309877 DDX49Q9Y6V7 483 aaKnown RBP25.96■■□□□ 1.75
IRF3-201ENST00000309877 IQCA1LA6NCM1 817 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 VEGFAP15692 232 aaPredicted RBP25.96■■□□□ 1.75
IRF3-201ENST00000309877 KRT2P35908 639 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 SHISA4Q96DD7 197 aa25.96■■□□□ 1.75
IRF3-201ENST00000309877 BMP3P12645 472 aa25.95■■□□□ 1.74
IRF3-201ENST00000309877 NOSTRINQ8IVI9 506 aa25.95■■□□□ 1.74
IRF3-201ENST00000309877 ADGRF4Q8IZF3 695 aa25.95■■□□□ 1.74
IRF3-201ENST00000309877 ZNF112Q9UJU3 913 aa25.95■■□□□ 1.74
IRF3-201ENST00000309877 CALML3P27482 149 aa25.94■■□□□ 1.74
IRF3-201ENST00000309877 INPP5BP32019 993 aa25.94■■□□□ 1.74
IRF3-201ENST00000309877 SLC16A2P36021 539 aa25.94■■□□□ 1.74
IRF3-201ENST00000309877 CEBPZQ03701 1054 aaKnown RBP25.94■■□□□ 1.74
IRF3-201ENST00000309877 WWC2Q6AWC2 1192 aa25.94■■□□□ 1.74
IRF3-201ENST00000309877 CCDC148Q8NFR7 591 aa25.94■■□□□ 1.74
IRF3-201ENST00000309877 ZC3H15Q8WU90 426 aaKnown RBP25.94■■□□□ 1.74
IRF3-201ENST00000309877 WRNIP1Q96S55 665 aa25.94■■□□□ 1.74
IRF3-201ENST00000309877 BARHL2Q9NY43 387 aa25.94■■□□□ 1.74
IRF3-201ENST00000309877 KRT26Q7Z3Y9 468 aa25.93■■□□□ 1.74
IRF3-201ENST00000309877 FAM177A1Q8N128 213 aaPredicted RBP25.93■■□□□ 1.74
IRF3-201ENST00000309877 CCDC12Q8WUD4 166 aaPredicted RBP25.93■■□□□ 1.74
IRF3-201ENST00000309877 LEO1Q8WVC0 666 aaPredicted RBP25.93■■□□□ 1.74
IRF3-201ENST00000309877 USP28Q96RU2 1077 aa25.93■■□□□ 1.74
IRF3-201ENST00000309877 JMJD4Q9H9V9 463 aa25.93■■□□□ 1.74
IRF3-201ENST00000309877 NR5A1Q13285 461 aa25.93■■□□□ 1.74
IRF3-201ENST00000309877 CCDC84Q86UT8 332 aaPredicted RBP25.93■■□□□ 1.74
IRF3-201ENST00000309877 SPICE1Q8N0Z3 855 aa25.93■■□□□ 1.74
IRF3-201ENST00000309877 OXER1Q8TDS5 423 aa25.93■■□□□ 1.74
IRF3-201ENST00000309877 NUP88Q99567 741 aaPredicted RBP25.93■■□□□ 1.74
IRF3-201ENST00000309877 FEZ1Q99689 392 aa25.93■■□□□ 1.74
IRF3-201ENST00000309877 BAZ2BQ9UIF8 2168 aaKnown RBP25.93■■□□□ 1.74
IRF3-201ENST00000309877 ELP1O95163 1332 aa25.92■■□□□ 1.74
IRF3-201ENST00000309877 ADM5C9JUS6 153 aa25.92■■□□□ 1.74
IRF3-201ENST00000309877 STXBP3O00186 592 aa25.92■■□□□ 1.74
IRF3-201ENST00000309877 IKQ13123 557 aaPredicted RBP25.92■■□□□ 1.74
IRF3-201ENST00000309877 SCYL3Q8IZE3 742 aa25.92■■□□□ 1.74
IRF3-201ENST00000309877 TAF1DQ9H5J8 278 aaPredicted RBP25.92■■□□□ 1.74
IRF3-201ENST00000309877 VCPKMTQ9H867 229 aa25.92■■□□□ 1.74
IRF3-201ENST00000309877 PICK1Q9NRD5 415 aa25.92■■□□□ 1.74
IRF3-201ENST00000309877 hCG_1984214I3L0E3 225 aa25.91■■□□□ 1.74
IRF3-201ENST00000309877 GADD45BO75293 160 aaPredicted RBP25.91■■□□□ 1.74
IRF3-201ENST00000309877 UBE2HP62256 183 aa25.91■■□□□ 1.74
IRF3-201ENST00000309877 ZYXQ15942 572 aaKnown RBP25.91■■□□□ 1.74
IRF3-201ENST00000309877 KLHL40Q2TBA0 621 aa25.91■■□□□ 1.74
IRF3-201ENST00000309877 EAPPQ56P03 285 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms