RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ERCC3P19447 782 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 TFAP4Q01664 338 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 DPF3Q92784 378 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 ISY1Q9ULR0 285 aaKnown RBP20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 RLFQ13129 1914 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 F5H6K3 240 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 NDUFB10O96000 172 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 KLRC3Q07444 240 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 CACNB2Q08289 660 aaPredicted RBP20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 DPP9Q86TI2 863 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 CHMP4CQ96CF2 233 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 INCENPQ9NQS7 918 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 A0A0G2JMZ2 1700 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 GRB14Q14449 540 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 TMEM132BQ14DG7 1078 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 TOMM22Q9NS69 142 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 MTMR4Q9NYA4 1195 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 PPP1R9AQ9ULJ8 1098 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 TSPY2A6NKD2 308 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 TTLL1O95922 423 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 ADORA2AP29274 412 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 CCND3P30281 292 aaPredicted RBP20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 MAP3K21Q5TCX8 1036 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 MFSD14CQ5VZR4 134 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 ZNF589Q86UQ0 364 aaPredicted RBP20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 SHCBP1Q8NEM2 672 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 NEDD1Q8NHV4 660 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 NPLOC4Q8TAT6 608 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 SLF1Q9BQI6 1058 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 HTATIP2Q9BUP3 242 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 CRISPLD2Q9H0B8 497 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 FLRT1Q9NZU1 646 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 RANBP6O60518 1105 aaKnown RBP20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 SLC4A3P48751 1232 aa20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 UBE2Q1Q7Z7E8 422 aa20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 DIS3LQ8TF46 1054 aaKnown RBP20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 PAWRQ96IZ0 340 aaKnown RBP20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 MROH8Q9H579 483 aa20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 CCDC171Q6TFL3 1326 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 MYH4Q9Y623 1939 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 PARP14Q460N5 1801 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 VWA5AO00534 786 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 SDSP20132 328 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 RRP12Q5JTH9 1297 aaKnown RBP20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 OSBPL3Q9H4L5 887 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 DIAPH3Q9NSV4 1193 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 STX8Q9UNK0 236 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 STRNO43815 780 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 FGAP02671 866 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 HSPD1P10809 573 aaKnown RBP20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 CNGA1P29973 690 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 CYP2C19P33261 490 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 STAT3P40763 770 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 HAND2P61296 217 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 SLFN13Q68D06 897 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 KIFC2Q96AC6 838 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 COL11A1P12107 1806 aaPredicted RBP20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 H0YGN5 161 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 NMT2O60551 498 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 SLC25A27O95847 323 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 HOXC6P09630 235 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 FCER1AP12319 257 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 ALX1Q15699 326 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 CWC27Q6UX04 472 aaKnown RBP20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 NECAB2Q7Z6G3 386 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 CPXCR1Q8N123 301 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 MKL1Q969V6 931 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 TACC3Q9Y6A5 838 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 COBLO75128 1261 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 IKQ13123 557 aaPredicted RBP20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 TICAM2Q86XR7 235 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 RIOX2Q8IUF8 465 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 GMCL1P1Q8NEA9 526 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 MMP19Q99542 508 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 SLC5A4Q9NY91 659 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 ZNF214Q9UL59 606 aaPredicted RBP20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 CEP290O15078 2479 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 BMP3P12645 472 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 CAPN2P17655 700 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 MFAP1P55081 439 aaKnown RBP20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 SNRNP48Q6IEG0 339 aaKnown RBP20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 ANKLE1Q8NAG6 615 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 REPS2Q8NFH8 660 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 OGDHLQ9ULD0 1010 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 ZBED4O75132 1171 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 PGK2P07205 417 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 PDE4AP27815 886 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 KCTD2Q14681 263 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 TEX13BQ9BXU2 312 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 IL17RBQ9NRM6 502 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms