RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CYP7A1P22680 504 aa18.26■□□□□ 0.51
CCDC8-201ENST00000307522 SEPT12Q8IYM1 358 aa18.26■□□□□ 0.51
CCDC8-201ENST00000307522 NAPGQ99747 312 aaPredicted RBP18.26■□□□□ 0.51
CCDC8-201ENST00000307522 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
CCDC8-201ENST00000307522 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
CCDC8-201ENST00000307522 RFC4P35249 363 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 NAIF1Q69YI7 327 aaPredicted RBP18.25■□□□□ 0.51
CCDC8-201ENST00000307522 PSMB7Q99436 277 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 ACBD3Q9H3P7 528 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 MED4Q9NPJ6 270 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 SLC4A4Q9Y6R1 1079 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 RNF225M0QZC1 329 aaPredicted RBP18.25■□□□□ 0.51
CCDC8-201ENST00000307522 CMA1P23946 247 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 FXR1P51114 621 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCDC8-201ENST00000307522 ANTXR2P58335 489 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 E2F5Q15329 346 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
CCDC8-201ENST00000307522 CCDC148Q8NFR7 591 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 STAMQ92783 540 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 NAPBQ9H115 298 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.25■□□□□ 0.51
CCDC8-201ENST00000307522 TACC3Q9Y6A5 838 aa18.25■□□□□ 0.51
CCDC8-201ENST00000307522 TJP1Q07157 1748 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 COL4A1P02462 1669 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 CCDC189A1A4V9 331 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 EZH2Q15910 746 aaKnown RBP18.24■□□□□ 0.51
CCDC8-201ENST00000307522 NUP133Q8WUM0 1156 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 LLPHQ9BRT6 129 aaKnown RBP18.24■□□□□ 0.51
CCDC8-201ENST00000307522 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 CAPS2Q9BXY5 557 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
CCDC8-201ENST00000307522 PHLPP1O60346 1717 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 AGPSO00116 658 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 NDUFAB1O14561 156 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 CDCA7Q9BWT1 371 aaPredicted RBP18.24■□□□□ 0.51
CCDC8-201ENST00000307522 EPB41L4AQ9HCS5 686 aaPredicted RBP18.24■□□□□ 0.51
CCDC8-201ENST00000307522 HOOK1Q9UJC3 728 aaKnown RBP18.24■□□□□ 0.51
CCDC8-201ENST00000307522 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
CCDC8-201ENST00000307522 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
CCDC8-201ENST00000307522 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 SETQ01105 290 aaPredicted RBP18.23■□□□□ 0.51
CCDC8-201ENST00000307522 ANKIB1Q9P2G1 1089 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 ZNF652Q9Y2D9 606 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
CCDC8-201ENST00000307522 RPSAP08865 295 aaKnown RBP18.23■□□□□ 0.51
CCDC8-201ENST00000307522 TRDNQ13061 729 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
CCDC8-201ENST00000307522 TUBE1Q9UJT0 475 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 MAN1B1Q9UKM7 699 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 PES1O00541 588 aaKnown RBP18.23■□□□□ 0.51
CCDC8-201ENST00000307522 AFMP43652 599 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 SLC7A5Q01650 507 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 LRCH2Q5VUJ6 765 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 OTUD6BQ8N6M0 293 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 CAGE1Q8TC20 777 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 SELENOOQ9BVL4 669 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 POLR3EQ9NVU0 708 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 KCNH3Q9ULD8 1083 aa18.23■□□□□ 0.51
CCDC8-201ENST00000307522 BCL9LQ86UU0 1499 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 BACH1O14867 736 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 POLR2DO15514 142 aaKnown RBP18.22■□□□□ 0.51
CCDC8-201ENST00000307522 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
CCDC8-201ENST00000307522 PPARAQ07869 468 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 C2orf54Q08AI8 447 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 NFIXQ14938 502 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCDC8-201ENST00000307522 SMARCAL1Q9NZC9 954 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 MINPP1Q9UNW1 487 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 MAP3K12Q12852 859 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 USP49Q70CQ1 688 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 CTCFLQ8NI51 663 aaPredicted RBP18.22■□□□□ 0.51
CCDC8-201ENST00000307522 HDAC7Q8WUI4 952 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 GBP3Q9H0R5 595 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 SALL1Q9NSC2 1324 aa18.22■□□□□ 0.51
CCDC8-201ENST00000307522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 GOLGA6BA6NDN3 693 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 ATP1A1P05023 1023 aaKnown RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 ARL8AQ96BM9 186 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 SERTAD1Q9UHV2 236 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 UBR2Q8IWV8 1755 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 CCDC196A0A1B0GTZ2 297 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 YEATS4O95619 227 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 PDHBP11177 359 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 EXOSC10Q01780 885 aaKnown RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 APBA1Q02410 837 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 BIRC2Q13490 618 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 VPS72Q15906 364 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 EEF2KMTQ96G04 330 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 PRDX5P30044 214 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 ERVK-24P63145 666 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 COG1Q8WTW3 980 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 CABS1Q96KC9 395 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 SCLT1Q96NL6 688 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms