RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 POLRMTO00411 1230 aaKnown RBP22.74■■□□□ 1.23
CXCL16-201ENST00000293778 ZNF18P17022 549 aa22.74■■□□□ 1.23
CXCL16-201ENST00000293778 ERCC5P28715 1186 aaPredicted RBP22.74■■□□□ 1.23
CXCL16-201ENST00000293778 CDK8P49336 464 aa22.74■■□□□ 1.23
CXCL16-201ENST00000293778 C16orf86Q6ZW13 317 aa22.74■■□□□ 1.23
CXCL16-201ENST00000293778 MTMR7Q9Y216 660 aa22.74■■□□□ 1.23
CXCL16-201ENST00000293778 FLT1P17948 1338 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 FAM205AQ6ZU69 1335 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 TMEM232C9JQI7 657 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 C6orf229H3BNL8 230 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 HSPA1LP34931 641 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 KCNJ6P48051 423 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 HSP90AA4PQ58FG1 418 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 FAM163AQ96GL9 167 aaPredicted RBP22.73■■□□□ 1.23
CXCL16-201ENST00000293778 EYA3Q99504 573 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 TOP1P11387 765 aaKnown RBP22.73■■□□□ 1.23
CXCL16-201ENST00000293778 CDK11BP21127 795 aaKnown RBP22.73■■□□□ 1.23
CXCL16-201ENST00000293778 DPYDQ12882 1025 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 SLC35G1Q2M3R5 365 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 E4F1Q66K89 784 aaPredicted RBP22.73■■□□□ 1.23
CXCL16-201ENST00000293778 ZNF592Q92610 1267 aa22.73■■□□□ 1.23
CXCL16-201ENST00000293778 SNED1Q8TER0 1413 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 PALM3A6NDB9 673 aaPredicted RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 RHBDL3P58872 404 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 CT47A1Q5JQC4 288 aaPredicted RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 TYW1BQ6NUM6 668 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 CCDC148Q8NFR7 591 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 GSDMAQ96QA5 445 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 MED15Q96RN5 788 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 QTRT2Q9H974 415 aaKnown RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 INTS13Q9NVM9 706 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 DDX60LQ5H9U9 1706 aaKnown RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 GAKO14976 1311 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 KLRG2A4D1S0 409 aaPredicted RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 CTIFO43310 598 aaKnown RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 CYTH3O43739 400 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 CASP1P29466 404 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 IL17AQ16552 155 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 ARL6IP4Q66PJ3 421 aaKnown RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 WWC2Q6AWC2 1192 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 IQUBQ8NA54 791 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 CCDC112Q8NEF3 446 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 LZTS2Q9BRK4 669 aa22.72■■□□□ 1.23
CXCL16-201ENST00000293778 PYM1Q9BRP8 204 aaKnown RBP22.72■■□□□ 1.23
CXCL16-201ENST00000293778 TRIM37O94972 964 aa22.71■■□□□ 1.23
CXCL16-201ENST00000293778 E2F4Q16254 413 aa22.71■■□□□ 1.23
CXCL16-201ENST00000293778 HEATR3Q7Z4Q2 680 aa22.71■■□□□ 1.23
CXCL16-201ENST00000293778 ZNF710Q8N1W2 664 aa22.71■■□□□ 1.23
CXCL16-201ENST00000293778 NEDD1Q8NHV4 660 aa22.71■■□□□ 1.23
CXCL16-201ENST00000293778 RASGRP4Q8TDF6 673 aa22.71■■□□□ 1.23
CXCL16-201ENST00000293778 CCDC194A0A1B0GVG4 234 aa22.7■■□□□ 1.23
CXCL16-201ENST00000293778 PSDA5PKW4 1024 aaPredicted RBP22.7■■□□□ 1.23
CXCL16-201ENST00000293778 GALNT17Q6IS24 598 aa22.7■■□□□ 1.23
CXCL16-201ENST00000293778 TMC4Q7Z404 712 aa22.7■■□□□ 1.23
CXCL16-201ENST00000293778 DAGLBQ8NCG7 672 aa22.7■■□□□ 1.23
CXCL16-201ENST00000293778 M0R2N6 131 aa22.7■■□□□ 1.22
CXCL16-201ENST00000293778 C4orf32Q8N8J7 132 aa22.7■■□□□ 1.22
CXCL16-201ENST00000293778 SAMSN1Q9NSI8 373 aaKnown RBP22.7■■□□□ 1.22
CXCL16-201ENST00000293778 BARHL2Q9NY43 387 aa22.7■■□□□ 1.22
CXCL16-201ENST00000293778 KLRF2D3W0D1 207 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 STXBP3O00186 592 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 PPEF1O14829 653 aaPredicted RBP22.69■■□□□ 1.22
CXCL16-201ENST00000293778 GOLGA8HP0CJ92 632 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 LONP1P36776 959 aaKnown RBP22.69■■□□□ 1.22
CXCL16-201ENST00000293778 SP8Q8IXZ3 490 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 PCDHA6Q9UN73 950 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 PCDHA8Q9Y5H6 950 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 KIF2AO00139 706 aaPredicted RBP22.69■■□□□ 1.22
CXCL16-201ENST00000293778 PTPN21Q16825 1174 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 GLIPR1L2Q4G1C9 344 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 KRT27Q7Z3Y8 459 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 PPP1R13BQ96KQ4 1090 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 LRRC37AA6NMS7 1700 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 LTBP1Q14766 1721 aa22.69■■□□□ 1.22
CXCL16-201ENST00000293778 CD44P16070 742 aaKnown RBP22.68■■□□□ 1.22
CXCL16-201ENST00000293778 GTF2IP78347 998 aa22.68■■□□□ 1.22
CXCL16-201ENST00000293778 CUL4BQ13620 913 aa22.68■■□□□ 1.22
CXCL16-201ENST00000293778 PDXDC2PQ6P474 469 aa22.68■■□□□ 1.22
CXCL16-201ENST00000293778 STAMQ92783 540 aa22.68■■□□□ 1.22
CXCL16-201ENST00000293778 SPZ1Q9BXG8 430 aa22.68■■□□□ 1.22
CXCL16-201ENST00000293778 KLHL10Q6JEL2 608 aa22.67■■□□□ 1.22
CXCL16-201ENST00000293778 FAM177A1Q8N128 213 aaPredicted RBP22.67■■□□□ 1.22
CXCL16-201ENST00000293778 TMX1Q9H3N1 280 aa22.67■■□□□ 1.22
CXCL16-201ENST00000293778 DAGLAQ9Y4D2 1042 aa22.67■■□□□ 1.22
CXCL16-201ENST00000293778 SYNRGQ9UMZ2 1314 aa22.67■■□□□ 1.22
CXCL16-201ENST00000293778 PARP1P09874 1014 aaKnown RBP22.67■■□□□ 1.22
CXCL16-201ENST00000293778 SPATA1Q5VX52 437 aa22.67■■□□□ 1.22
CXCL16-201ENST00000293778 RIMBP2O15034 1052 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 TXLNAP40222 546 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 TBX2Q13207 712 aaPredicted RBP22.66■■□□□ 1.22
CXCL16-201ENST00000293778 RASGRP2Q7LDG7 609 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 MYH1P12882 1939 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 TXNRD1Q16881 649 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 SPECC1LQ69YQ0 1117 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 KIF18AQ8NI77 898 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 CEP95Q96GE4 821 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 COA1Q9GZY4 146 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 BLZF1Q9H2G9 400 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 ATP6V0A2Q9Y487 856 aa22.66■■□□□ 1.22
CXCL16-201ENST00000293778 PPP1R3GB7ZBB8 358 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms