RNA–Protein interactions for RNA: ENST00000293683.9

PDE4A-201, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-201ENST00000293683 VPS18Q9P253 973 aa19.56■□□□□ 0.72
PDE4A-201ENST00000293683 LIMA1Q9UHB6 759 aaKnown RBP19.56■□□□□ 0.72
PDE4A-201ENST00000293683 XIRP1Q702N8 1843 aaKnown RBP19.56■□□□□ 0.72
PDE4A-201ENST00000293683 TRIM49BA6NDI0 452 aa19.56■□□□□ 0.72
PDE4A-201ENST00000293683 KRT9P35527 623 aa19.56■□□□□ 0.72
PDE4A-201ENST00000293683 PAK1Q13153 545 aa19.56■□□□□ 0.72
PDE4A-201ENST00000293683 KCNJ18B7U540 433 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 KCNJ12Q14500 433 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 CCDC152Q4G0S7 254 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 TCP11X2Q5H9J9 407 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 TMTC1Q8IUR5 882 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 IQUBQ8NA54 791 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 BRMS1Q9HCU9 246 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 RNF216Q9NWF9 866 aaPredicted RBP19.55■□□□□ 0.72
PDE4A-201ENST00000293683 REXO2Q9Y3B8 237 aaKnown RBP19.55■□□□□ 0.72
PDE4A-201ENST00000293683 USP5P45974 858 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 ZSCAN26Q16670 478 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 FAM47AQ5JRC9 791 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 HNRNPLLQ8WVV9 542 aaKnown RBP19.55■□□□□ 0.72
PDE4A-201ENST00000293683 CCDC51Q96ER9 411 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 RWDD2AQ9UIY3 292 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 L1RE1Q9UN81 338 aa19.55■□□□□ 0.72
PDE4A-201ENST00000293683 GPS2Q13227 327 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 PPP2R5BQ15173 497 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 SLC4A8Q2Y0W8 1093 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 IQCA1Q86XH1 822 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 LRRC10BA6NIK2 292 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 BMP15O95972 392 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 PRCPP42785 496 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 EIF5P55010 431 aaKnown RBP19.54■□□□□ 0.72
PDE4A-201ENST00000293683 CYP26C1Q6V0L0 522 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 GUCA1BQ9UMX6 200 aa19.54■□□□□ 0.72
PDE4A-201ENST00000293683 CTAGE15A4D2H0 777 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 USP17L12C9JPN9 530 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 USP17L21D6R901 530 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 ENC1O14682 589 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 CTAGE8P0CG41 777 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 NLRP5P59047 1200 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 UBXN1Q04323 297 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 CTR9Q6PD62 1173 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 HDXQ7Z353 690 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 CTAGE6Q86UF2 777 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 CTAGE4Q8IX94 777 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 AK7Q96M32 723 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
PDE4A-201ENST00000293683 PODXL2Q9NZ53 605 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 HDAC6Q9UBN7 1215 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 PMS1P54277 932 aaKnown RBP19.53■□□□□ 0.72
PDE4A-201ENST00000293683 AMPD2Q01433 879 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 IRF2BP1Q8IU81 584 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 EEF2KMTQ96G04 330 aa19.53■□□□□ 0.72
PDE4A-201ENST00000293683 ZFP91Q96JP5 570 aaPredicted RBP19.53■□□□□ 0.72
PDE4A-201ENST00000293683 DISP2A7MBM2 1401 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 GTPBP6O43824 516 aaPredicted RBP19.52■□□□□ 0.72
PDE4A-201ENST00000293683 RPN1P04843 607 aaKnown RBP19.52■□□□□ 0.72
PDE4A-201ENST00000293683 INTS5Q6P9B9 1019 aaKnown RBP19.52■□□□□ 0.72
PDE4A-201ENST00000293683 RASGRP4Q8TDF6 673 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 EXOC4Q96A65 974 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 NIP7Q9Y221 180 aaKnown RBP eCLIP19.52■□□□□ 0.72
PDE4A-201ENST00000293683 FAN1Q9Y2M0 1017 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 CACNA1SQ13698 1873 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 TTC26A0AVF1 554 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 PP2D1A8MPX8 630 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 PHACTR2O75167 634 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 MUM1L1Q5H9M0 696 aa19.52■□□□□ 0.72
PDE4A-201ENST00000293683 MYH13Q9UKX3 1938 aa19.52■□□□□ 0.71
PDE4A-201ENST00000293683 ZNF804BA4D1E1 1349 aa19.52■□□□□ 0.71
PDE4A-201ENST00000293683 FAM205AQ6ZU69 1335 aa19.52■□□□□ 0.71
PDE4A-201ENST00000293683 PES1O00541 588 aaKnown RBP19.51■□□□□ 0.71
PDE4A-201ENST00000293683 NTSR2O95665 410 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 ZNF658Q5TYW1 1059 aaPredicted RBP19.51■□□□□ 0.71
PDE4A-201ENST00000293683 C3orf67Q6ZVT6 689 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 LCMT1Q9UIC8 334 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 MYO6Q9UM54 1294 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 CYP2D6P10635 497 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 SCG2P13521 617 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 CASP8Q14790 479 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 GPKOWQ92917 476 aaPredicted RBP eCLIP19.51■□□□□ 0.71
PDE4A-201ENST00000293683 PLIN2Q99541 437 aa19.51■□□□□ 0.71
PDE4A-201ENST00000293683 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 NDUFA10O95299 355 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 WHAMMP3Q1A5X7 153 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 CTCFLQ8NI51 663 aaPredicted RBP19.5■□□□□ 0.71
PDE4A-201ENST00000293683 EPN1Q9Y6I3 576 aaPredicted RBP19.5■□□□□ 0.71
PDE4A-201ENST00000293683 TAF1P21675 1872 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 LRRIQ3A6PVS8 624 aaPredicted RBP19.5■□□□□ 0.71
PDE4A-201ENST00000293683 SRGAP2O75044 1071 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 ERLIN1O75477 346 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 DDAH1O94760 285 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 CAMTA2O94983 1202 aa19.5■□□□□ 0.71
PDE4A-201ENST00000293683 PARP1P09874 1014 aaKnown RBP19.5■□□□□ 0.71
PDE4A-201ENST00000293683 CRKLP46109 303 aaKnown RBP19.5■□□□□ 0.71
PDE4A-201ENST00000293683 BRIP1Q9BX63 1249 aa19.49■□□□□ 0.71
PDE4A-201ENST00000293683 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
PDE4A-201ENST00000293683 KLRK1P26718 216 aa19.49■□□□□ 0.71
PDE4A-201ENST00000293683 GTF2E1P29083 439 aaPredicted RBP19.49■□□□□ 0.71
PDE4A-201ENST00000293683 STAT6P42226 847 aa19.49■□□□□ 0.71
PDE4A-201ENST00000293683 SPAG1Q07617 926 aa19.49■□□□□ 0.71
PDE4A-201ENST00000293683 CALM1P0DP23 149 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms