RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 CHMP4BP1P59074 171 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 NBPF11Q86T75 865 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 RWDD2AQ9UIY3 292 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 KRT9P35527 623 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 TNNT3P45378 269 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 DMTNQ08495 405 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 GOLGA8FQ08AF8 430 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 GOLGA8DPQ0D2H9 430 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 CCDC181Q5TID7 509 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 LEKR1Q6ZMV7 388 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 FAM84BQ96KN1 310 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 POLR3GO15318 223 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 COPB1P53618 953 aaKnown RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 FAM193AP78312 1265 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 ZNF658Q5TYW1 1059 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 RUFY1Q96T51 708 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 DESI2Q9BSY9 194 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 CUEDC2Q9H467 287 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 DCP1AQ9NPI6 582 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 NOM1Q5C9Z4 860 aaKnown RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 CNNM4Q6P4Q7 775 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-201ENST00000287936 CALCOCO1Q9P1Z2 691 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 SPATA31A1Q5TZJ5 1347 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 ATP8B1O43520 1251 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 HLA-DOAP06340 250 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 IDEP14735 1019 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 CACNA2D4Q7Z3S7 1137 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 TGFBRAP1Q8WUH2 860 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
HMGCR-201ENST00000287936 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
HMGCR-201ENST00000287936 ATP2C1P98194 919 aaPredicted RBP11.29□□□□□ -0.6
HMGCR-201ENST00000287936 PDE4DQ08499 809 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 IKQ13123 557 aaPredicted RBP11.29□□□□□ -0.6
HMGCR-201ENST00000287936 FBXO38Q6PIJ6 1188 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 CABP7Q86V35 215 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 IQCDQ96DY2 449 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 MPHOSPH10O00566 681 aaKnown RBP11.29□□□□□ -0.6
HMGCR-201ENST00000287936 UFL1O94874 794 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 KRT79Q5XKE5 535 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 SV2BQ7L1I2 683 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 CSGALNACT2Q8N6G5 542 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
HMGCR-201ENST00000287936 SLC4A9Q96Q91 983 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 NARFQ9UHQ1 456 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 GGA1Q9UJY5 639 aa11.29□□□□□ -0.6
HMGCR-201ENST00000287936 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
HMGCR-201ENST00000287936 RBL2Q08999 1139 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 RABGGTAQ92696 567 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 GPKOWQ92917 476 aaPredicted RBP eCLIP11.28□□□□□ -0.69e-7■■□□□ 12.4
HMGCR-201ENST00000287936 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 ALS2CR12Q96Q35 445 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
HMGCR-201ENST00000287936 ERICH4A6NGS2 130 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 ITPK1Q13572 414 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 SBK1Q52WX2 424 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 MAPKAPK5Q8IW41 473 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 NSUN4Q96CB9 384 aaKnown RBP11.28□□□□□ -0.6
HMGCR-201ENST00000287936 PLIN2Q99541 437 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 MAPK8IP1Q9UQF2 711 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 XDHP47989 1333 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
HMGCR-201ENST00000287936 CASP14P31944 242 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 TOB1P50616 345 aaPredicted RBP11.28□□□□□ -0.6
HMGCR-201ENST00000287936 OR8K1Q8NGG5 319 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 AK8Q96MA6 479 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 EYA3Q99504 573 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
HMGCR-201ENST00000287936 MYO1AQ9UBC5 1043 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 GUCA1BQ9UMX6 200 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 TBC1D8BQ0IIM8 1120 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 BRD3Q15059 726 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 SEC23AQ15436 765 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 INF2Q27J81 1249 aa11.28□□□□□ -0.6
HMGCR-201ENST00000287936 OR52Z1P0C646 297 aa11.27□□□□□ -0.6
HMGCR-201ENST00000287936 EEF1GP26641 437 aaKnown RBP11.27□□□□□ -0.6
HMGCR-201ENST00000287936 PTPN21Q16825 1174 aa11.27□□□□□ -0.6
HMGCR-201ENST00000287936 WHAMMP3Q1A5X7 153 aa11.27□□□□□ -0.6
HMGCR-201ENST00000287936 A0A1B0GTH6 734 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 MFAP3LO75121 409 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 DNM2P50570 870 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 FMR1Q06787 632 aaKnown RBP eCLIP11.27□□□□□ -0.613e-6■■□□□ 14.1
HMGCR-201ENST00000287936 SEMA3FQ13275 785 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 NAA30Q147X3 362 aaPredicted RBP11.27□□□□□ -0.61
HMGCR-201ENST00000287936 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 SMYD4Q8IYR2 804 aaPredicted RBP11.27□□□□□ -0.61
HMGCR-201ENST00000287936 CCDC24Q8N4L8 307 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 TSGA10Q9BZW7 698 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 ZHX3Q9H4I2 956 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 L2HGDHQ9H9P8 463 aa11.27□□□□□ -0.61
HMGCR-201ENST00000287936 COL18A1P39060 1754 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms