RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 DDB1Q16531 1140 aa13.69□□□□□ -0.22
ARFGEF1-201ENST00000262215 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
ARFGEF1-201ENST00000262215 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 POSTNQ15063 836 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 GNPATO15228 680 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 SYF2O95926 243 aaKnown RBP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 ANGPTL3Q9Y5C1 460 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 HNRNPCL2B2RXH8 293 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 HNRNPCL1O60812 293 aaKnown RBP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 GPC4O75487 556 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 IGBP1P78318 339 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 P3H4Q92791 437 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 ALKBH8Q96BT7 664 aaKnown RBP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 ADCY7P51828 1080 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 YWHAGP61981 247 aaKnown RBP eCLIP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 EAPPQ56P03 285 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 RSBN1LQ6PCB5 846 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 RAB17Q9H0T7 212 aa13.68□□□□□ -0.22
ARFGEF1-201ENST00000262215 NLRP12P59046 1061 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SCYL3Q8IZE3 742 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 CCDC138Q96M89 665 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SCHIP1Q9P0W5 487 aaPredicted RBP13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 TTC4O95801 387 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 TMTC1Q8IUR5 882 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 BCAS4Q8TDM0 211 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SLC27A2O14975 620 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 MAP3K21Q5TCX8 1036 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 RPAINQ86UA6 219 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 NOC2LQ9Y3T9 749 aaKnown RBP13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 IGF1RP08069 1367 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 PALM3A6NDB9 673 aaPredicted RBP13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 ANKRD13CQ8N6S4 541 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SH2D4AQ9H788 454 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 CD2APQ9Y5K6 639 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SAR1BQ9Y6B6 198 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SART1O43290 800 aaKnown RBP13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 NPR1P16066 1061 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 PHBP35232 272 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 NOP14P78316 857 aaKnown RBP13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 DMTNQ08495 405 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SLC4A7Q9Y6M7 1214 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 ASPHQ12797 758 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 PDCD2Q16342 344 aaPredicted RBP13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 OTUD7AQ8TE49 926 aaPredicted RBP13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 SUGCTQ9HAC7 445 aa13.67□□□□□ -0.22
ARFGEF1-201ENST00000262215 EYA3Q99504 573 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 Q9H521 79 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 PRG4Q92954 1404 aaPredicted RBP13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 H7C0C1 242 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 ATP5OP48047 213 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 DEPTORQ8TB45 409 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 NLRP7Q8WX94 980 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 CCDC127Q96BQ5 260 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 SERTAD1Q9UHV2 236 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 RLBP1P12271 317 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 SNX1Q13596 522 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 MYCBPQ99417 103 aaPredicted RBP13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 JAK2O60674 1132 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 ZMYND10O75800 440 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 ATP6V1E1P36543 226 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 ZNF148Q9UQR1 794 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 ZBED4O75132 1171 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 HABP4Q5JVS0 413 aaKnown RBP13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 RBM17Q96I25 401 aaKnown RBP13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 CAPS2Q9BXY5 557 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 LRRC8CQ8TDW0 803 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 THRAP3Q9Y2W1 955 aaKnown RBP13.66□□□□□ -0.22
ARFGEF1-201ENST00000262215 MYCP01106 439 aaPredicted RBP13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 ITGA6P23229 1130 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 HIBADHP31937 336 aaKnown RBP13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 CCT5P48643 541 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 IRX4P78413 519 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 NONOQ15233 471 aaKnown RBP eCLIP13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 XPO4Q9C0E2 1151 aaKnown RBP13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 KDRP35968 1356 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 GSTA4O15217 222 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 TRAPPC10P48553 1259 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 AP1ARQ63HQ0 302 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 CDC37L1Q7L3B6 337 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 UBN1Q9NPG3 1134 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 SBNO1A3KN83 1393 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 TECP42680 631 aa13.65□□□□□ -0.22
ARFGEF1-201ENST00000262215 POLE2P56282 527 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms