RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CNGA4Q8IV77 575 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 LIMA1Q9UHB6 759 aaKnown RBP17.25■□□□□ 0.35
DDX56-201ENST00000258772 RWDD2AQ9UIY3 292 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 SEC31AO94979 1220 aaKnown RBP17.25■□□□□ 0.35
DDX56-201ENST00000258772 FXR1P51114 621 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDX56-201ENST00000258772 SBK1Q52WX2 424 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 RABGGTAQ92696 567 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 CCDC51Q96ER9 411 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 ARPP21Q9UBL0 812 aaPredicted RBP17.25■□□□□ 0.35
DDX56-201ENST00000258772 PDS5AQ29RF7 1337 aaKnown RBP17.25■□□□□ 0.35
DDX56-201ENST00000258772 A0A0U1RQJ8 604 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 TSPY2A6NKD2 308 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 KCNQ2O43526 872 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 ADAMTS2O95450 1211 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 FECHP22830 423 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
DDX56-201ENST00000258772 CCT6AP40227 531 aaKnown RBP17.24■□□□□ 0.35
DDX56-201ENST00000258772 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
DDX56-201ENST00000258772 FAM193AP78312 1265 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
DDX56-201ENST00000258772 ATRIPQ8WXE1 791 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 LAMB1P07942 1786 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 N4BP3O15049 544 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 PRDX5P30044 214 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 KIF5BP33176 963 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
DDX56-201ENST00000258772 C4orf32Q8N8J7 132 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
DDX56-201ENST00000258772 COL5A3P25940 1745 aaPredicted RBP17.23■□□□□ 0.35
DDX56-201ENST00000258772 KIF5CO60282 957 aa17.23■□□□□ 0.35
DDX56-201ENST00000258772 PAK1Q13153 545 aa17.23■□□□□ 0.35
DDX56-201ENST00000258772 ZNF658Q5TYW1 1059 aaPredicted RBP17.23■□□□□ 0.35
DDX56-201ENST00000258772 GOLGA1Q92805 767 aa17.23■□□□□ 0.35
DDX56-201ENST00000258772 PARD6BQ9BYG5 372 aa17.23■□□□□ 0.35
DDX56-201ENST00000258772 CALML3P27482 149 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 LONP1P36776 959 aaKnown RBP17.22■□□□□ 0.35
DDX56-201ENST00000258772 SPAG1Q07617 926 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 BLIDQ8IZY5 108 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 VPS16Q9H269 839 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 RPN1P04843 607 aaKnown RBP17.22■□□□□ 0.35
DDX56-201ENST00000258772 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
DDX56-201ENST00000258772 TBC1D9BQ66K14 1250 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 TMTC1Q8IUR5 882 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 NELFBQ8WX92 580 aa17.22■□□□□ 0.35
DDX56-201ENST00000258772 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 CDC25AP30304 524 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 TCP11X2Q5H9J9 407 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 SH3GLB2Q9NR46 395 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 RMND1Q9NWS8 449 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 MCM9Q9NXL9 1143 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 KCNJ18B7U540 433 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 SASH3O75995 380 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 TXLNAP40222 546 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 PDE4CQ08493 712 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 KCNJ12Q14500 433 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 NLRP3Q96P20 1036 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 ANKRD2Q9GZV1 360 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 KAT14Q9H8E8 782 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 ABHD10Q9NUJ1 306 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 CDC23Q9UJX2 597 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
DDX56-201ENST00000258772 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
DDX56-201ENST00000258772 RNF225M0QZC1 329 aaPredicted RBP17.2■□□□□ 0.34
DDX56-201ENST00000258772 USP17L8P0C7I0 530 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 PRCPP42785 496 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 ZNF569Q5MCW4 686 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 SRGAP1Q7Z6B7 1085 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 ANKRD20A12PQ8NF67 263 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 UBXN6Q9BZV1 441 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 ARFGAP3Q9NP61 516 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 IL17RBQ9NRM6 502 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 TAB2Q9NYJ8 693 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 PCDHA4Q9UN74 947 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 ERVK-24P63145 666 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 TFAP4Q01664 338 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 STAG2Q8N3U4 1231 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 ACRBPQ8NEB7 543 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 GPKOWQ92917 476 aaPredicted RBP eCLIP17.2■□□□□ 0.345e-7■■■■■ 43.5
DDX56-201ENST00000258772 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
DDX56-201ENST00000258772 GDAQ9Y2T3 454 aa17.2■□□□□ 0.34
DDX56-201ENST00000258772 NRAPQ86VF7 1730 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 STAT6P42226 847 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 KCNQ4P56696 695 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 JAKMIP3Q5VZ66 844 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 TMED8Q6PL24 325 aaPredicted RBP17.19■□□□□ 0.34
DDX56-201ENST00000258772 PNMA1Q8ND90 353 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 ZSWIM4Q9H7M6 989 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 DISC1Q9NRI5 854 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 MAPK8IP1Q9UQF2 711 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms