RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 USP17L17D6RBQ6 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L19D6RCP7 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L20D6RJB6 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 BMP3P12645 472 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 USP17L24Q0WX57 530 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 SAMD1Q6SPF0 538 aaPredicted RBP17.56■□□□□ 0.4
RPA3-201ENST00000223129 TMTC2Q8N394 836 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 BRF1Q92994 677 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 GMCL1Q96IK5 515 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 ASCC2Q9H1I8 757 aaPredicted RBP17.56■□□□□ 0.4
RPA3-201ENST00000223129 FBXO28Q9NVF7 368 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 RNF186Q9NXI6 227 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 BRPF3Q9ULD4 1205 aa17.56■□□□□ 0.4
RPA3-201ENST00000223129 FRMPD2Q68DX3 1309 aaPredicted RBP17.56■□□□□ 0.4
RPA3-201ENST00000223129 TRPA1O75762 1119 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 GOLGA8HP0CJ92 632 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 NEK4P51957 841 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
RPA3-201ENST00000223129 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 RXRAP19793 462 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 MAP2K1Q02750 393 aaPredicted RBP17.55■□□□□ 0.4
RPA3-201ENST00000223129 TROAPQ12815 778 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 PABPC4Q13310 644 aaKnown RBP eCLIP17.55■□□□□ 0.49e-8■■□□□ 12.6
RPA3-201ENST00000223129 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
RPA3-201ENST00000223129 TAF1CQ15572 869 aaPredicted RBP17.55■□□□□ 0.4
RPA3-201ENST00000223129 CCDC96Q2M329 555 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 TTBK2Q6IQ55 1244 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 CATIPQ7Z7H3 387 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 SGMS1Q86VZ5 419 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 R3HDMLQ9H3Y0 253 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 GPCPD1Q9NPB8 672 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 SLC45A1Q9Y2W3 748 aa17.55■□□□□ 0.4
RPA3-201ENST00000223129 TMEM232C9JQI7 657 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 FLOT1O75955 427 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 OSBPP22059 807 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
RPA3-201ENST00000223129 AGXT2Q9BYV1 514 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 TBC1D8O95759 1140 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 CRHR2Q13324 411 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 CCDC144CPQ8IYA2 1237 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 FBXL16Q8N461 479 aa17.54■□□□□ 0.4
RPA3-201ENST00000223129 ZCCHC17Q9NP64 241 aaKnown RBP17.54■□□□□ 0.4
RPA3-201ENST00000223129 NAP1L2Q9ULW6 460 aaPredicted RBP17.54■□□□□ 0.4
RPA3-201ENST00000223129 KLF18A0A0U1RQI7 1052 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 ALDH1A1P00352 501 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 SLC16A2P36021 539 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 COG2Q14746 738 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 STAG2Q8N3U4 1231 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 JMYQ8N9B5 988 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 WBP1LQ9NX94 342 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 PNMA3Q9UL41 463 aa17.53■□□□□ 0.4
RPA3-201ENST00000223129 CA12O43570 354 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 PEX10O60683 326 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 AK2P54819 239 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 APOA5Q6Q788 366 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 POTEEQ6S8J3 1075 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 MICU3Q86XE3 530 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 TSKSQ9UJT2 592 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 RLFQ13129 1914 aa17.52■□□□□ 0.4
RPA3-201ENST00000223129 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.39
RPA3-201ENST00000223129 HERVK_113P62684 666 aa17.52■□□□□ 0.39
RPA3-201ENST00000223129 IKQ13123 557 aaPredicted RBP17.52■□□□□ 0.39
RPA3-201ENST00000223129 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.39
RPA3-201ENST00000223129 SMCR8Q8TEV9 937 aaPredicted RBP17.52■□□□□ 0.39
RPA3-201ENST00000223129 KIFC2Q96AC6 838 aa17.52■□□□□ 0.39
RPA3-201ENST00000223129 PARK7Q99497 189 aaKnown RBP17.52■□□□□ 0.39
RPA3-201ENST00000223129 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.39
RPA3-201ENST00000223129 ZFYVE28Q9HCC9 887 aa17.52■□□□□ 0.39
RPA3-201ENST00000223129 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.39
RPA3-201ENST00000223129 FEM1BQ9UK73 627 aa17.52■□□□□ 0.39
RPA3-201ENST00000223129 SPDYE16A6NNV3 312 aaPredicted RBP17.51■□□□□ 0.39
RPA3-201ENST00000223129 DDAH1O94760 285 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 DSG3P32926 999 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 STAT2P52630 851 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 GRM4Q14833 912 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 SYNE3Q6ZMZ3 975 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 ATG4CQ96DT6 458 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 SLF1Q9BQI6 1058 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 BEGAINQ9BUH8 593 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
RPA3-201ENST00000223129 HOXC10Q9NYD6 342 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 CPA4Q9UI42 421 aa17.51■□□□□ 0.39
RPA3-201ENST00000223129 PPP1R9AQ9ULJ8 1098 aa17.5■□□□□ 0.39
RPA3-201ENST00000223129 PARP14Q460N5 1801 aa17.5■□□□□ 0.39
RPA3-201ENST00000223129 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
RPA3-201ENST00000223129 ZBTB43O43298 467 aa17.5■□□□□ 0.39
RPA3-201ENST00000223129 TLR2O60603 784 aa17.5■□□□□ 0.39
RPA3-201ENST00000223129 RABEP1Q15276 862 aa17.5■□□□□ 0.39
RPA3-201ENST00000223129 ASPRV1Q53RT3 343 aa17.5■□□□□ 0.39
RPA3-201ENST00000223129 GPATCH4Q5T3I0 446 aaKnown RBP17.5■□□□□ 0.39
RPA3-201ENST00000223129 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
RPA3-201ENST00000223129 CHURC1Q8WUH1 139 aa17.5■□□□□ 0.39
RPA3-201ENST00000223129 KLRF2D3W0D1 207 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms