RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 MKL1Q969V6 931 aa23.1■■□□□ 1.29
PHGDH-210ENST00000641115 FAM217BQ9NTX9 383 aaPredicted RBP23.1■■□□□ 1.29
PHGDH-210ENST00000641115 JAK2O60674 1132 aa23.09■■□□□ 1.29
PHGDH-210ENST00000641115 GRM4Q14833 912 aa23.09■■□□□ 1.29
PHGDH-210ENST00000641115 DLK2Q6UY11 383 aa23.09■■□□□ 1.29
PHGDH-210ENST00000641115 SMARCC2Q8TAQ2 1214 aa23.09■■□□□ 1.29
PHGDH-210ENST00000641115 KLRG1Q96E93 195 aa23.09■■□□□ 1.29
PHGDH-210ENST00000641115 SYNPO2Q9UMS6 1093 aa23.09■■□□□ 1.29
PHGDH-210ENST00000641115 KIF3AQ9Y496 699 aa23.09■■□□□ 1.29
PHGDH-210ENST00000641115 INPP5BP32019 993 aa23.08■■□□□ 1.29
PHGDH-210ENST00000641115 DDIT3P35638 169 aa23.08■■□□□ 1.29
PHGDH-210ENST00000641115 MAP1SQ66K74 1059 aaPredicted RBP23.08■■□□□ 1.29
PHGDH-210ENST00000641115 SCYL3Q8IZE3 742 aa23.08■■□□□ 1.29
PHGDH-210ENST00000641115 OTOFQ9HC10 1997 aa23.08■■□□□ 1.29
PHGDH-210ENST00000641115 PAPPA2Q9BXP8 1791 aa23.08■■□□□ 1.29
PHGDH-210ENST00000641115 MYH6P13533 1939 aa23.08■■□□□ 1.29
PHGDH-210ENST00000641115 PRKG1Q13976 671 aa23.08■■□□□ 1.28
PHGDH-210ENST00000641115 FAM184AQ8NB25 1140 aa23.08■■□□□ 1.28
PHGDH-210ENST00000641115 DDX11Q96FC9 970 aa23.08■■□□□ 1.28
PHGDH-210ENST00000641115 SH2D4AQ9H788 454 aa23.08■■□□□ 1.28
PHGDH-210ENST00000641115 CIZ1Q9ULV3 898 aaPredicted RBP23.08■■□□□ 1.28
PHGDH-210ENST00000641115 FZD1Q9UP38 647 aa23.08■■□□□ 1.28
PHGDH-210ENST00000641115 DTNBO60941 627 aa23.07■■□□□ 1.28
PHGDH-210ENST00000641115 PARP1P09874 1014 aaKnown RBP23.07■■□□□ 1.28
PHGDH-210ENST00000641115 IFNAR1P17181 557 aa23.07■■□□□ 1.28
PHGDH-210ENST00000641115 GNAQP50148 359 aa23.07■■□□□ 1.28
PHGDH-210ENST00000641115 NTRK3Q16288 839 aa23.07■■□□□ 1.28
PHGDH-210ENST00000641115 SIAH1Q8IUQ4 282 aa23.07■■□□□ 1.28
PHGDH-210ENST00000641115 PICK1Q9NRD5 415 aa23.07■■□□□ 1.28
PHGDH-210ENST00000641115 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
PHGDH-210ENST00000641115 RAD21O60216 631 aa23.06■■□□□ 1.28
PHGDH-210ENST00000641115 USP2O75604 605 aaPredicted RBP23.06■■□□□ 1.28
PHGDH-210ENST00000641115 PDHBP11177 359 aa23.06■■□□□ 1.28
PHGDH-210ENST00000641115 IREB2P48200 963 aaKnown RBP23.06■■□□□ 1.28
PHGDH-210ENST00000641115 TMTC3Q6ZXV5 915 aa23.06■■□□□ 1.28
PHGDH-210ENST00000641115 TRIM22Q8IYM9 498 aa23.06■■□□□ 1.28
PHGDH-210ENST00000641115 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.06■■□□□ 1.282e-7■■□□□ 13.6
PHGDH-210ENST00000641115 ZKSCAN4Q969J2 545 aaPredicted RBP23.06■■□□□ 1.28
PHGDH-210ENST00000641115 CHMP5Q9NZZ3 219 aa23.06■■□□□ 1.28
PHGDH-210ENST00000641115 PDCP20941 246 aa23.05■■□□□ 1.28
PHGDH-210ENST00000641115 GMCL1P1Q8NEA9 526 aa23.05■■□□□ 1.28
PHGDH-210ENST00000641115 MAD2L2Q9UI95 211 aa23.05■■□□□ 1.28
PHGDH-210ENST00000641115 USP17L5A8MUK1 530 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 PPFIA3O75145 1194 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 PLEKHA8P1O95397 391 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 SNHG28P0DPA3 235 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 SSRP1Q08945 709 aaKnown RBP23.04■■□□□ 1.28
PHGDH-210ENST00000641115 TTLL12Q14166 644 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-210ENST00000641115 ASPRV1Q53RT3 343 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 NOL9Q5SY16 702 aaKnown RBP23.04■■□□□ 1.28
PHGDH-210ENST00000641115 PHKBQ93100 1093 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 SLC26A6Q9BXS9 759 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 GOPCQ9HD26 462 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 ORC3Q9UBD5 711 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-210ENST00000641115 TMX2Q9Y320 296 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 STK36Q9NRP7 1315 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 A0A1W2PRG0 241 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 PALM3A6NDB9 673 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-210ENST00000641115 ECE1P42892 770 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 SLFN13Q68D06 897 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 USP17L2Q6R6M4 530 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 RASGRP2Q7LDG7 609 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 CMTR1Q8N1G2 835 aaKnown RBP23.04■■□□□ 1.28
PHGDH-210ENST00000641115 CCDC82Q8N4S0 544 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 DCAF4Q8WV16 495 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 FEZ1Q99689 392 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 LZTS2Q9BRK4 669 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 AS3MTQ9HBK9 375 aa23.04■■□□□ 1.28
PHGDH-210ENST00000641115 F5H6K3 240 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 FMNL1O95466 1100 aaPredicted RBP23.03■■□□□ 1.28
PHGDH-210ENST00000641115 GOLGA8HP0CJ92 632 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 MAP3K9P80192 1104 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 NUCB2P80303 420 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 AKAP17AQ02040 695 aaKnown RBP23.03■■□□□ 1.28
PHGDH-210ENST00000641115 KLRC3Q07444 240 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 CCDC96Q2M329 555 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 GPATCH4Q5T3I0 446 aaKnown RBP23.03■■□□□ 1.28
PHGDH-210ENST00000641115 STAG2Q8N3U4 1231 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 ACER1Q8TDN7 264 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 RNF26Q9BY78 433 aaPredicted RBP23.03■■□□□ 1.28
PHGDH-210ENST00000641115 CSADQ9Y600 493 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 PHIPQ8WWQ0 1821 aa23.03■■□□□ 1.28
PHGDH-210ENST00000641115 KLRF2D3W0D1 207 aa23.02■■□□□ 1.28
PHGDH-210ENST00000641115 PDIA4P13667 645 aaKnown RBP23.02■■□□□ 1.28
PHGDH-210ENST00000641115 SLC1A4P43007 532 aa23.02■■□□□ 1.28
PHGDH-210ENST00000641115 LARP1BQ659C4 914 aaKnown RBP23.02■■□□□ 1.28
PHGDH-210ENST00000641115 NBPF11Q86T75 865 aa23.02■■□□□ 1.28
PHGDH-210ENST00000641115 CCDC84Q86UT8 332 aaPredicted RBP23.02■■□□□ 1.28
PHGDH-210ENST00000641115 FDPSP14324 419 aaKnown RBP23.01■■□□□ 1.27
PHGDH-210ENST00000641115 PTPRAP18433 802 aa23.01■■□□□ 1.27
PHGDH-210ENST00000641115 ZNF543Q08ER8 600 aa23.01■■□□□ 1.27
PHGDH-210ENST00000641115 ARMC9Q7Z3E5 817 aa23.01■■□□□ 1.27
PHGDH-210ENST00000641115 SRBD1Q8N5C6 995 aaKnown RBP23.01■■□□□ 1.27
PHGDH-210ENST00000641115 WASF1Q92558 559 aa23.01■■□□□ 1.27
PHGDH-210ENST00000641115 GMCL1Q96IK5 515 aa23.01■■□□□ 1.27
PHGDH-210ENST00000641115 ISY1Q9ULR0 285 aaKnown RBP23.01■■□□□ 1.27
PHGDH-210ENST00000641115 FRMPD2Q68DX3 1309 aaPredicted RBP23.01■■□□□ 1.27
PHGDH-210ENST00000641115 CNTNAP5Q8WYK1 1306 aa23.01■■□□□ 1.27
PHGDH-210ENST00000641115 TRAF5O00463 557 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 DEXIO95424 95 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms