RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 GPKOWQ92917 476 aaPredicted RBP eCLIP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 EPN1Q9Y6I3 576 aaPredicted RBP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 GTPBP6O43824 516 aaPredicted RBP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 NELFCDQ8IXH7 590 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 RGS22Q8NE09 1264 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 TGFBRAP1Q8WUH2 860 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 ATG3Q9NT62 314 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 CRB1P82279 1406 aa18.57■□□□□ 0.56
SCARB2-210ENST00000638567 RPAP1Q9BWH6 1393 aaPredicted RBP18.57■□□□□ 0.56
SCARB2-210ENST00000638567 UFL1O94874 794 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 FMNL1O95466 1100 aaPredicted RBP18.56■□□□□ 0.56
SCARB2-210ENST00000638567 REXO1Q8N1G1 1221 aaKnown RBP18.56■□□□□ 0.56
SCARB2-210ENST00000638567 GSDMAQ96QA5 445 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 PLEKHA4Q9H4M7 779 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 MAN1B1Q9UKM7 699 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 H7C1W4 665 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 IFNAR1P17181 557 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 RPS8P62241 208 aaKnown RBP18.56■□□□□ 0.56
SCARB2-210ENST00000638567 PNMA1Q8ND90 353 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 CDC23Q9UJX2 597 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 ZBTB1Q9Y2K1 713 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 H7C1D1 291 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 VSTM4Q8IW00 320 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 DNM2P50570 870 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 CALCRLQ16602 461 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 PLA2G4DQ86XP0 818 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 SLC35F6Q8N357 371 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 HAUS4Q9H6D7 363 aa18.56■□□□□ 0.56
SCARB2-210ENST00000638567 CHRNDQ07001 517 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 TRAF1Q13077 416 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 PPP4R3AQ6IN85 833 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 BICD1Q96G01 975 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 SMCO2A6NFE2 343 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 EZRP15311 586 aaKnown RBP18.55■□□□□ 0.56
SCARB2-210ENST00000638567 COPB1P53618 953 aaKnown RBP18.55■□□□□ 0.56
SCARB2-210ENST00000638567 TICAM2Q86XR7 235 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 RNF26Q9BY78 433 aaPredicted RBP18.55■□□□□ 0.56
SCARB2-210ENST00000638567 MMP1P03956 469 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 RPN1P04843 607 aaKnown RBP18.55■□□□□ 0.56
SCARB2-210ENST00000638567 CALRP27797 417 aaKnown RBP18.55■□□□□ 0.56
SCARB2-210ENST00000638567 KLHL7Q8IXQ5 586 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 IFT20Q8IY31 132 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 HINFPQ9BQA5 517 aa18.55■□□□□ 0.56
SCARB2-210ENST00000638567 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 SRGAP1Q7Z6B7 1085 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 CCDC25Q86WR0 208 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
SCARB2-210ENST00000638567 PHLPP2Q6ZVD8 1323 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 CLCN6P51797 869 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 CCDC91Q7Z6B0 441 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 C8orf37Q96NL8 207 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 ADCY7P51828 1080 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 RBL2Q08999 1139 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 FMR1NBQ8N0W7 255 aaPredicted RBP18.54■□□□□ 0.56
SCARB2-210ENST00000638567 ENOX1Q8TC92 643 aaKnown RBP18.54■□□□□ 0.56
SCARB2-210ENST00000638567 CCDC114Q96M63 670 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 PDE11AQ9HCR9 933 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 PCDHB6Q9Y5E3 794 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 CEP104O60308 925 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 DESP17661 470 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 KLHL30Q0D2K2 578 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 ASIC2Q16515 512 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 VWA3BQ502W6 1294 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 AXIN2Q9Y2T1 843 aa18.54■□□□□ 0.56
SCARB2-210ENST00000638567 CYP27B1O15528 508 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 SLAIN2Q9P270 581 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 BIN2Q9UBW5 565 aaPredicted RBP18.53■□□□□ 0.56
SCARB2-210ENST00000638567 GOLGA8HP0CJ92 632 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 PAIP2Q9BPZ3 127 aaKnown RBP18.53■□□□□ 0.56
SCARB2-210ENST00000638567 TRIM31Q9BZY9 425 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 PIH1D3Q9NQM4 214 aaKnown RBP18.53■□□□□ 0.56
SCARB2-210ENST00000638567 SEC31BQ9NQW1 1179 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 HEG1Q9ULI3 1381 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 USP27XA6NNY8 438 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 SLFN14P0C7P3 912 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 EPB41P11171 864 aaKnown RBP18.53■□□□□ 0.56
SCARB2-210ENST00000638567 CDC25AP30304 524 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 TECP42680 631 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 LONRF2Q1L5Z9 754 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 CEP57Q86XR8 500 aa18.53■□□□□ 0.56
SCARB2-210ENST00000638567 A0A1W2PRG0 241 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 ENC1O14682 589 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 GJC1P36383 396 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 LCORLQ8N3X6 602 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 KIF4AO95239 1232 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 CFAP221Q4G0U5 840 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 SOWAHDA6NJG2 315 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 CCDC26Q8TAB7 109 aa18.52■□□□□ 0.56
SCARB2-210ENST00000638567 NSRP1Q9H0G5 558 aaKnown RBP18.52■□□□□ 0.56
SCARB2-210ENST00000638567 HMGB2P26583 209 aaKnown RBP18.52■□□□□ 0.55
SCARB2-210ENST00000638567 NLRP10Q86W26 655 aa18.52■□□□□ 0.55
SCARB2-210ENST00000638567 ANKRD13CQ8N6S4 541 aa18.52■□□□□ 0.55
SCARB2-210ENST00000638567 CHGBP05060 677 aa18.51■□□□□ 0.55
SCARB2-210ENST00000638567 LIFRP42702 1097 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms