RNA–Protein interactions for RNA: ENST00000638160.1

CHML-205, Transcript of CHM like, Rab escort protein 2, human

TSL 3 BASIC

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHML-205	ENST00000638160	ERVK-24	P63145	666 aa		31.98	■■■□□ 2.71
CHML-205	ENST00000638160	ATP2B2	Q01814	1243 aa		31.98	■■■□□ 2.71
CHML-205	ENST00000638160	IRF5	Q13568	498 aa		31.98	■■■□□ 2.71
CHML-205	ENST00000638160	COG2	Q14746	738 aa		31.98	■■■□□ 2.71
CHML-205	ENST00000638160	TMEM106C	Q9BVX2	250 aa		31.98	■■■□□ 2.71
CHML-205	ENST00000638160		Q3C1V9	767 aa		31.97	■■■□□ 2.71
CHML-205	ENST00000638160	VPS53	Q5VIR6	699 aa		31.97	■■■□□ 2.71
CHML-205	ENST00000638160	POTEE	Q6S8J3	1075 aa		31.97	■■■□□ 2.71
CHML-205	ENST00000638160	SLAIN1	Q8ND83	568 aa		31.97	■■■□□ 2.71
CHML-205	ENST00000638160	PAGR1	Q9BTK6	254 aa		31.97	■■■□□ 2.71
CHML-205	ENST00000638160	HIP1	O00291	1037 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	PRDM1	O75626	825 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	PDE4A	P27815	886 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	MAPK4	P31152	587 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	MFAP1	P55081	439 aa	Known RBP	31.96	■■■□□ 2.71
CHML-205	ENST00000638160	KIAA1755	Q5JYT7	1200 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	TANGO6	Q9C0B7	1094 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	GOPC	Q9HD26	462 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	NYAP2	Q9P242	653 aa		31.96	■■■□□ 2.71
CHML-205	ENST00000638160	PEX10	O60683	326 aa		31.95	■■■□□ 2.71
CHML-205	ENST00000638160	CCAR1	Q8IX12	1150 aa	Known RBP	31.95	■■■□□ 2.71
CHML-205	ENST00000638160	PXYLP1	Q8TE99	480 aa		31.95	■■■□□ 2.71
CHML-205	ENST00000638160	SPDYE16	A6NNV3	312 aa	Predicted RBP	31.94	■■■□□ 2.7
CHML-205	ENST00000638160	WDR46	O15213	610 aa	Known RBP	31.94	■■■□□ 2.7
CHML-205	ENST00000638160	ADCY3	O60266	1144 aa		31.94	■■■□□ 2.7
CHML-205	ENST00000638160	CCNA1	P78396	465 aa		31.94	■■■□□ 2.7
CHML-205	ENST00000638160	SPICE1	Q8N0Z3	855 aa		31.94	■■■□□ 2.7
CHML-205	ENST00000638160	ANAPC4	Q9UJX5	808 aa		31.94	■■■□□ 2.7
CHML-205	ENST00000638160	GJD2	Q9UKL4	321 aa		31.94	■■■□□ 2.7
CHML-205	ENST00000638160	KIAA0100	Q14667	2235 aa	Known RBP	31.94	■■■□□ 2.7
CHML-205	ENST00000638160	IGKV6D-41	A0A0C4DH26	115 aa		31.93	■■■□□ 2.7
CHML-205	ENST00000638160	HSPD1	P10809	573 aa	Known RBP	31.93	■■■□□ 2.7
CHML-205	ENST00000638160	ZNF589	Q86UQ0	364 aa	Predicted RBP	31.93	■■■□□ 2.7
CHML-205	ENST00000638160	DIAPH3	Q9NSV4	1193 aa		31.93	■■■□□ 2.7
CHML-205	ENST00000638160	BIN2	Q9UBW5	565 aa	Predicted RBP	31.93	■■■□□ 2.7
CHML-205	ENST00000638160	CCDC171	Q6TFL3	1326 aa		31.93	■■■□□ 2.7
CHML-205	ENST00000638160	POTEF	A5A3E0	1075 aa		31.92	■■■□□ 2.7
CHML-205	ENST00000638160	CNMD	O75829	334 aa		31.92	■■■□□ 2.7
CHML-205	ENST00000638160	FGA	P02671	866 aa		31.92	■■■□□ 2.7
CHML-205	ENST00000638160	NEDD1	Q8NHV4	660 aa		31.92	■■■□□ 2.7
CHML-205	ENST00000638160	DOCK3	Q8IZD9	2030 aa		31.92	■■■□□ 2.7
CHML-205	ENST00000638160	TSPY3	P0CV98	308 aa		31.91	■■■□□ 2.7
CHML-205	ENST00000638160	TSPY8	P0CW00	308 aa		31.91	■■■□□ 2.7
CHML-205	ENST00000638160	UBXN2A	P68543	259 aa		31.91	■■■□□ 2.7
CHML-205	ENST00000638160	MTMR4	Q9NYA4	1195 aa		31.91	■■■□□ 2.7
CHML-205	ENST00000638160	CENPF	P49454	3210 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	FLOT1	O75955	427 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	TFAP4	Q01664	338 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	CTDSPL2	Q05D32	466 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	TTC22	Q5TAA0	569 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	CWC27	Q6UX04	472 aa	Known RBP	31.9	■■■□□ 2.7
CHML-205	ENST00000638160	MB21D1	Q8N884	522 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	MKL1	Q969V6	931 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	PORCN	Q9H237	461 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	CLIP2	Q9UDT6	1046 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	SYNPO2	Q9UMS6	1093 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	31.9	■■■□□ 2.7
CHML-205	ENST00000638160	ZMYM6	O95789	1325 aa		31.9	■■■□□ 2.7
CHML-205	ENST00000638160	DSG3	P32926	999 aa		31.89	■■■□□ 2.7
CHML-205	ENST00000638160	SOCS4	Q8WXH5	440 aa		31.89	■■■□□ 2.7
CHML-205	ENST00000638160	CEP95	Q96GE4	821 aa		31.89	■■■□□ 2.7
CHML-205	ENST00000638160	NUDT12	Q9BQG2	462 aa		31.89	■■■□□ 2.7
CHML-205	ENST00000638160	BTBD7	Q9P203	1132 aa		31.89	■■■□□ 2.7
CHML-205	ENST00000638160	PLIN4	Q96Q06	1357 aa		31.89	■■■□□ 2.7
CHML-205	ENST00000638160	GREB1L	Q9C091	1923 aa	Predicted RBP	31.88	■■■□□ 2.69
CHML-205	ENST00000638160	TTLL1	O95922	423 aa		31.88	■■■□□ 2.69
CHML-205	ENST00000638160	MYC	P01106	439 aa	Predicted RBP	31.88	■■■□□ 2.69
CHML-205	ENST00000638160	FAM47A	Q5JRC9	791 aa		31.88	■■■□□ 2.69
CHML-205	ENST00000638160	PPP4R3B	Q5MIZ7	849 aa		31.88	■■■□□ 2.69
CHML-205	ENST00000638160	PLEKHH3	Q7Z736	793 aa		31.88	■■■□□ 2.69
CHML-205	ENST00000638160	RAD21	O60216	631 aa		31.87	■■■□□ 2.69
CHML-205	ENST00000638160	ELN	P15502	786 aa		31.87	■■■□□ 2.69
CHML-205	ENST00000638160	GPR142	Q7Z601	462 aa		31.87	■■■□□ 2.69
CHML-205	ENST00000638160	CWC22	Q9HCG8	908 aa	Known RBP	31.87	■■■□□ 2.69
CHML-205	ENST00000638160		F5H6K3	240 aa		31.86	■■■□□ 2.69
CHML-205	ENST00000638160	FGR	P09769	529 aa		31.86	■■■□□ 2.69
CHML-205	ENST00000638160	KLRC3	Q07444	240 aa		31.86	■■■□□ 2.69
CHML-205	ENST00000638160	MTFR1	Q15390	333 aa		31.86	■■■□□ 2.69
CHML-205	ENST00000638160	ORC4	O43929	436 aa		31.85	■■■□□ 2.69
CHML-205	ENST00000638160	XRCC5	P13010	732 aa	Known RBP	31.85	■■■□□ 2.69
CHML-205	ENST00000638160	GSPT1	P15170	499 aa	Known RBP	31.85	■■■□□ 2.69
CHML-205	ENST00000638160	EN2	P19622	333 aa	Predicted RBP	31.85	■■■□□ 2.69
CHML-205	ENST00000638160	INCENP	Q9NQS7	918 aa		31.85	■■■□□ 2.69
CHML-205	ENST00000638160	TSPY2	A6NKD2	308 aa		31.84	■■■□□ 2.69
CHML-205	ENST00000638160	INHA	P05111	366 aa		31.84	■■■□□ 2.69
CHML-205	ENST00000638160	CCL5	P13501	91 aa		31.84	■■■□□ 2.69
CHML-205	ENST00000638160	FAM83B	Q5T0W9	1011 aa		31.84	■■■□□ 2.69
CHML-205	ENST00000638160	ADAMTS5	Q9UNA0	930 aa		31.84	■■■□□ 2.69
CHML-205	ENST00000638160	RANBP6	O60518	1105 aa	Known RBP	31.83	■■■□□ 2.69
CHML-205	ENST00000638160	NDUFB10	O96000	172 aa		31.83	■■■□□ 2.69
CHML-205	ENST00000638160	MORN1	Q5T089	497 aa		31.83	■■■□□ 2.69
CHML-205	ENST00000638160	USP6NL	Q92738	828 aa		31.83	■■■□□ 2.69
CHML-205	ENST00000638160	ATG4C	Q96DT6	458 aa		31.83	■■■□□ 2.69
CHML-205	ENST00000638160	SPATC1L	Q9H0A9	340 aa		31.83	■■■□□ 2.69
CHML-205	ENST00000638160	RNF208	Q9H0X6	261 aa		31.83	■■■□□ 2.69
CHML-205	ENST00000638160	PC	P11498	1178 aa	Known RBP	31.82	■■■□□ 2.68
CHML-205	ENST00000638160	CYP2B6	P20813	491 aa		31.82	■■■□□ 2.68
CHML-205	ENST00000638160	WDR78	Q5VTH9	848 aa		31.82	■■■□□ 2.68
CHML-205	ENST00000638160	TRMT44	Q8IYL2	757 aa	Known RBP	31.82	■■■□□ 2.68
CHML-205	ENST00000638160	NKX2-3	Q8TAU0	364 aa		31.82	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms