RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TMEM191BP0C7N4 346 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 APOBEC3FQ8IUX4 373 aaKnown RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 GIMAP8Q8ND71 665 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 NUP58Q9BVL2 599 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 TNNI1P19237 187 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 ABCC11Q96J66 1382 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 TRPM2O94759 1503 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 PLCD1P51178 756 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 RNF214Q8ND24 703 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 TEKT4Q8WW24 435 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 TRPV6Q9H1D0 765 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 ENC1O14682 589 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 BCAR3O75815 825 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 HTATIP2Q9BUP3 242 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 ECT2Q9H8V3 914 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 IL1RAPL2Q9NP60 686 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 L3MBTL3Q96JM7 780 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 N4BP3O15049 544 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 LIG4P49917 911 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 POLGP54098 1239 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 RNF181Q9P0P0 153 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC160A6NGH7 325 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 CAPZA2P47755 286 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC26Q8TAB7 109 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 PALMDQ9NP74 551 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 MAD1L1Q9Y6D9 718 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 ERICH3Q5RHP9 1530 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 I3L4J1 428 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 OTUB1Q96FW1 271 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 SPOPO43791 374 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 CAVIN2O95810 425 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 GSDMDP57764 484 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 GTF2H3Q13889 308 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 FYB2Q5VWT5 728 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 MAGEB6Q8N7X4 407 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 MYL3P08590 195 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 TCP10Q12799 353 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 RINT1Q6NUQ1 792 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 CENPSQ8N2Z9 138 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 GPCPD1Q9NPB8 672 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 KPNA2P52292 529 aaKnown RBP6.92□□□□□ -1.3
CDKL5-205ENST00000623535 AKAP4Q5JQC9 854 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 MAIP1Q8WWC4 291 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 BZW2Q9Y6E2 419 aaKnown RBP6.92□□□□□ -1.3
CDKL5-205ENST00000623535 GAS7O60861 476 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 STAM2O75886 525 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 APOA4P06727 396 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 KRT17Q04695 432 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 SETDB1Q15047 1291 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 SLC9C1Q4G0N8 1177 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 TTLL6Q8N841 843 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 TSSK1BQ9BXA7 367 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 A6NJR5 290 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 HADHQ16836 314 aaKnown RBP6.92□□□□□ -1.3
CDKL5-205ENST00000623535 MIER3Q7Z3K6 550 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 FOPNLQ96NB1 174 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 DNM3Q9UQ16 869 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 AK9Q5TCS8 1911 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 SMARCA4P51532 1647 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 DYRK3O43781 588 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 ARHGAP15Q53QZ3 475 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 SNX30Q5VWJ9 437 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC13Q8IYE1 715 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 C7orf31Q8N865 590 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 GDPD2Q9HCC8 539 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 CFBP00751 764 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 HDAC4P56524 1084 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 EZH2Q15910 746 aaKnown RBP6.92□□□□□ -1.3
CDKL5-205ENST00000623535 SLC9C2Q5TAH2 1124 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 MIS18BP1Q6P0N0 1132 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 ARHGAP24Q8N264 748 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 GTF3C2Q8WUA4 911 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-205ENST00000623535 PCDHB9Q9Y5E1 797 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 AATKQ6ZMQ8 1374 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 POLR2DO15514 142 aaKnown RBP6.92□□□□□ -1.3
CDKL5-205ENST00000623535 ARL13BQ3SXY8 428 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 FANCIQ9NVI1 1328 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 ATP6V1E2Q96A05 226 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 YIPF2Q9BWQ6 316 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 TTF2Q9UNY4 1162 aaKnown RBP6.92□□□□□ -1.3
CDKL5-205ENST00000623535 KCNH2Q12809 1159 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 SPC24Q8NBT2 197 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 ANKRD36BP1Q96IX9 119 aa6.92□□□□□ -1.3
CDKL5-205ENST00000623535 GBP1P32455 592 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CIAPIN1Q6FI81 312 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ZNF713Q8N859 430 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 TBC1D2Q9BYX2 928 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ST7Q9NRC1 585 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 NFKBIL1Q9UBC1 381 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 N4BP1O75113 896 aaKnown RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 PDCD2Q16342 344 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CTR9Q6PD62 1173 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 GAS2L1Q99501 681 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ECHDC1Q9NTX5 307 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ALAS1P13196 640 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ARHGAP4P98171 946 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ZNF365Q70YC5 407 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms