RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ATRNL1Q5VV63 1379 aa24.77■■□□□ 1.56
SPAST-204ENST00000621856 FAM196BA6NMK8 535 aa24.77■■□□□ 1.56
SPAST-204ENST00000621856 TCP10L2B9ZVM9 353 aa24.77■■□□□ 1.56
SPAST-204ENST00000621856 SLURP2P0DP57 97 aa24.77■■□□□ 1.56
SPAST-204ENST00000621856 DNAJC18Q9H819 358 aa24.77■■□□□ 1.56
SPAST-204ENST00000621856 CLIC4Q9Y696 253 aa24.77■■□□□ 1.56
SPAST-204ENST00000621856 BAZ2BQ9UIF8 2168 aaKnown RBP24.76■■□□□ 1.55
SPAST-204ENST00000621856 GREB1LQ9C091 1923 aaPredicted RBP24.76■■□□□ 1.55
SPAST-204ENST00000621856 SYCE3A1L190 88 aa24.76■■□□□ 1.55
SPAST-204ENST00000621856 BTBD18B2RXH4 712 aa24.76■■□□□ 1.55
SPAST-204ENST00000621856 PARP1P09874 1014 aaKnown RBP24.76■■□□□ 1.55
SPAST-204ENST00000621856 SCG2P13521 617 aa24.76■■□□□ 1.55
SPAST-204ENST00000621856 EIF6P56537 245 aaKnown RBP24.76■■□□□ 1.55
SPAST-204ENST00000621856 LZTS2Q9BRK4 669 aa24.76■■□□□ 1.55
SPAST-204ENST00000621856 FOXP1Q9H334 677 aaPredicted RBP24.76■■□□□ 1.55
SPAST-204ENST00000621856 SPON1Q9HCB6 807 aa24.76■■□□□ 1.55
SPAST-204ENST00000621856 POLR3EQ9NVU0 708 aa24.76■■□□□ 1.55
SPAST-204ENST00000621856 PALM3A6NDB9 673 aaPredicted RBP24.75■■□□□ 1.55
SPAST-204ENST00000621856 YEATS4O95619 227 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 TTLL1O95922 423 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 SF3A1Q15459 793 aaKnown RBP24.75■■□□□ 1.55
SPAST-204ENST00000621856 CERKLQ49MI3 558 aaPredicted RBP24.75■■□□□ 1.55
SPAST-204ENST00000621856 ANO1Q5XXA6 986 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 NOSTRINQ8IVI9 506 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 MTMR14Q8NCE2 650 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 ME1P48163 572 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 PFKFB3Q16875 520 aaPredicted RBP24.75■■□□□ 1.55
SPAST-204ENST00000621856 SPDYE2Q495Y8 402 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 PPP4R3BQ5MIZ7 849 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 GAS2L3Q86XJ1 694 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 CLEC10AQ8IUN9 316 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 LRRC47Q8N1G4 583 aaKnown RBP24.75■■□□□ 1.55
SPAST-204ENST00000621856 PHF20Q9BVI0 1012 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 CLIP2Q9UDT6 1046 aa24.75■■□□□ 1.55
SPAST-204ENST00000621856 GOLGA8HP0CJ92 632 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 LIG1P18858 919 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 NASPP49321 788 aaPredicted RBP24.74■■□□□ 1.55
SPAST-204ENST00000621856 LINC00301Q8NCQ3 95 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 KCNG4Q8TDN1 519 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 CSRNP1Q96S65 589 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 VEZTQ9HBM0 779 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 BRMS1Q9HCU9 246 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 MYH4Q9Y623 1939 aa24.74■■□□□ 1.55
SPAST-204ENST00000621856 KLRF2D3W0D1 207 aa24.73■■□□□ 1.55
SPAST-204ENST00000621856 MYO1BO43795 1136 aa24.73■■□□□ 1.55
SPAST-204ENST00000621856 KRT2P35908 639 aa24.73■■□□□ 1.55
SPAST-204ENST00000621856 ATP2B2Q01814 1243 aa24.73■■□□□ 1.55
SPAST-204ENST00000621856 USP17L2Q6R6M4 530 aa24.73■■□□□ 1.55
SPAST-204ENST00000621856 RASGRP2Q7LDG7 609 aa24.73■■□□□ 1.55
SPAST-204ENST00000621856 SHISA4Q96DD7 197 aa24.73■■□□□ 1.55
SPAST-204ENST00000621856 FAM151AQ8WW52 585 aa24.72■■□□□ 1.55
SPAST-204ENST00000621856 SPTLC2O15270 562 aa24.72■■□□□ 1.55
SPAST-204ENST00000621856 LETM1O95202 739 aaPredicted RBP24.72■■□□□ 1.55
SPAST-204ENST00000621856 NR5A1Q13285 461 aa24.72■■□□□ 1.55
SPAST-204ENST00000621856 TATDN1Q6P1N9 297 aa24.72■■□□□ 1.55
SPAST-204ENST00000621856 LRSAM1Q6UWE0 723 aa24.72■■□□□ 1.55
SPAST-204ENST00000621856 OXER1Q8TDS5 423 aa24.72■■□□□ 1.55
SPAST-204ENST00000621856 USP17L5A8MUK1 530 aa24.71■■□□□ 1.55
SPAST-204ENST00000621856 RPS12P25398 132 aaKnown RBP24.71■■□□□ 1.55
SPAST-204ENST00000621856 NLRP5P59047 1200 aa24.71■■□□□ 1.55
SPAST-204ENST00000621856 METTL16Q86W50 562 aaKnown RBP24.71■■□□□ 1.55
SPAST-204ENST00000621856 MYOZ2Q9NPC6 264 aa24.71■■□□□ 1.55
SPAST-204ENST00000621856 PDHBP11177 359 aa24.7■■□□□ 1.54
SPAST-204ENST00000621856 FKBP1CQ5VVH2 108 aa24.7■■□□□ 1.54
SPAST-204ENST00000621856 SPZ1Q9BXG8 430 aa24.7■■□□□ 1.54
SPAST-204ENST00000621856 CYTH3O43739 400 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 MRE11P49959 708 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 MMP14P50281 582 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 SLC35G1Q2M3R5 365 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 ASPRV1Q53RT3 343 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 CCAR1Q8IX12 1150 aaKnown RBP24.69■■□□□ 1.54
SPAST-204ENST00000621856 GRPEL1Q9HAV7 217 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 PCDHA7Q9UN72 937 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 GJA3Q9Y6H8 435 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 CNTNAP1P78357 1384 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 FRMPD2Q68DX3 1309 aaPredicted RBP24.69■■□□□ 1.54
SPAST-204ENST00000621856 SHTN1A0MZ66 631 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 ABCB5Q2M3G0 1257 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 TMEM179Q6ZVK1 233 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 GPKOWQ92917 476 aaPredicted RBP eCLIP24.69■■□□□ 1.54
SPAST-204ENST00000621856 ZBED3Q96IU2 234 aaPredicted RBP24.69■■□□□ 1.54
SPAST-204ENST00000621856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.69■■□□□ 1.54
SPAST-204ENST00000621856 SH3GLB2Q9NR46 395 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 DDX19AQ9NUU7 478 aaKnown RBP24.69■■□□□ 1.54
SPAST-204ENST00000621856 DACT1Q9NYF0 836 aa24.69■■□□□ 1.54
SPAST-204ENST00000621856 HERC5Q9UII4 1024 aaKnown RBP24.69■■□□□ 1.54
SPAST-204ENST00000621856 GOLGB1Q14789 3259 aaKnown RBP24.68■■□□□ 1.54
SPAST-204ENST00000621856 GDF11O95390 407 aa24.68■■□□□ 1.54
SPAST-204ENST00000621856 PRELPP51888 382 aa24.68■■□□□ 1.54
SPAST-204ENST00000621856 SLC39A14Q15043 492 aa24.68■■□□□ 1.54
SPAST-204ENST00000621856 RILPL1Q5EBL4 403 aa24.68■■□□□ 1.54
SPAST-204ENST00000621856 CPVLQ9H3G5 476 aa24.68■■□□□ 1.54
SPAST-204ENST00000621856 KANSL2Q9H9L4 492 aa24.68■■□□□ 1.54
SPAST-204ENST00000621856 WNT10BO00744 389 aa24.67■■□□□ 1.54
SPAST-204ENST00000621856 VEGFAP15692 232 aaPredicted RBP24.67■■□□□ 1.54
SPAST-204ENST00000621856 CALML3P27482 149 aa24.67■■□□□ 1.54
SPAST-204ENST00000621856 SMARCA1P28370 1054 aa24.67■■□□□ 1.54
SPAST-204ENST00000621856 ZNF280AP59817 542 aaPredicted RBP24.67■■□□□ 1.54
SPAST-204ENST00000621856 SHROOM1Q2M3G4 852 aaPredicted RBP24.67■■□□□ 1.54
SPAST-204ENST00000621856 NBPF9Q3BBW0 867 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms