RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 SPDYE5A6NIY4 337 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 VCAM1P19320 739 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 PSMC4P43686 418 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 GTF2A2P52657 109 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 CCT2P78371 535 aaKnown RBP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 OTUD7BQ6GQQ9 843 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 ATG4CQ96DT6 458 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 HERC5Q9UII4 1024 aaKnown RBP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 SCN4AP35499 1836 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 WDR90Q96KV7 1748 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 A0A1B0GUL6 1792 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 F5H6K3 240 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 SGSM2O43147 1006 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 PGK2P07205 417 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 CETPP11597 493 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 CASTP20810 708 aaKnown RBP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 PTGS1P23219 599 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 BACE1P56817 501 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 KLRC3Q07444 240 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 SREBF2Q12772 1141 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 AAMPQ13685 434 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 AKNAD1Q5T1N1 836 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 NSMFQ6X4W1 530 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 HOOK2Q96ED9 719 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 MS4A4AQ96JQ5 239 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 PURBQ96QR8 312 aaKnown RBP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 ASCC2Q9H1I8 757 aaPredicted RBP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 ARHGEF10LQ9HCE6 1279 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 RAVER2Q9HCJ3 691 aaKnown RBP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 TXNRD2Q9NNW7 524 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 HELLSQ9NRZ9 838 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 WBP1LQ9NX94 342 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 GPR25O00155 361 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 TNPO2O14787 897 aaKnown RBP5.43□□□□□ -1.54
SYCP1-210ENST00000618516 GNAT2P19087 354 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 GUCY1A2P33402 732 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 UBXN2AP68543 259 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 Q3C1V9 767 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 BMP2KLQ5H9B9 411 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 TMEM67Q5HYA8 995 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 STOX1Q6ZVD7 989 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 CYB5R4Q7L1T6 521 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 IQCA1Q86XH1 822 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 NBPF3Q9H094 633 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 PORCNQ9H237 461 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 EMILIN3Q9NT22 766 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 PPP2R3BQ9Y5P8 575 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 TNKSO95271 1327 aa5.43□□□□□ -1.54
SYCP1-210ENST00000618516 XIRP2A4UGR9 3374 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 ERICH2A1L162 156 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 NDUFB10O96000 172 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 ALAS1P13196 640 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 ZKSCAN1P17029 563 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-210ENST00000618516 IFIT1BQ5T764 474 aaKnown RBP5.42□□□□□ -1.54
SYCP1-210ENST00000618516 CREB3L3Q68CJ9 461 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 SLFN13Q68D06 897 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 ESR2Q92731 530 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 KAT14Q9H8E8 782 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 ZFYVE28Q9HCC9 887 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 NCOA5Q9HCD5 579 aaKnown RBP5.42□□□□□ -1.54
SYCP1-210ENST00000618516 AFG3L2Q9Y4W6 797 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 MANSC4A6NHS7 340 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-210ENST00000618516 E7EWF7 191 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 PPATQ06203 517 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 FKBP1CQ5VVH2 108 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 TMEM179Q6ZVK1 233 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 C16orf86Q6ZW13 317 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 BRF1Q92994 677 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 MRIQ9BWK5 157 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 AS3MTQ9HBK9 375 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 IL17RBQ9NRM6 502 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 PLSCR2Q9NRY7 297 aa5.42□□□□□ -1.54
SYCP1-210ENST00000618516 PDS5AQ29RF7 1337 aaKnown RBP5.42□□□□□ -1.54
SYCP1-210ENST00000618516 HIP1O00291 1037 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 SLC27A2O14975 620 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 PRC1O43663 620 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 CTCFP49711 727 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 FKBP1BP68106 108 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 SP4Q02446 784 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 SP3Q02447 781 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 APOBRQ0VD83 1088 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 PPIL2Q13356 520 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 FOXD4L6Q3SYB3 417 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 FOXD4L3Q6VB84 417 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 STAG2Q8N3U4 1231 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 RAET1EQ8TD07 263 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 OSBPL3Q9H4L5 887 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 KANSL2Q9H9L4 492 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 DOCK3Q8IZD9 2030 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 TTLL1O95922 423 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 MAP2K2P36507 400 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 HERVK_113P62684 666 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 PRKCZQ05513 592 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 PRAMEF19Q5SWL8 479 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 SIAH1Q8IUQ4 282 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 PNMA1Q8ND90 353 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 AGBL1Q96MI9 1066 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 TMEM47Q9BQJ4 181 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms