RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 AP5Z1O43299 807 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 DDAH1O94760 285 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ZNF202O95125 648 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CALM1P0DP23 149 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CALM2P0DP24 149 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CALM3P0DP25 149 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SCG2P13521 617 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 KCNA3P22001 575 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 KIF5BP33176 963 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 MCM7P33993 719 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 KRT2P35908 639 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 FAM160A1Q05DH4 1040 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 KIAA2012Q0VF49 1180 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 AXDND1Q5T1B0 1012 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 STRIP1Q5VSL9 837 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 TTBK2Q6IQ55 1244 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SHC4Q6S5L8 630 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 KCTD1Q719H9 257 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 MIGA2Q7L4E1 593 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 DGKHQ86XP1 1220 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 GRAMD1CQ8IYS0 662 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 STAMQ92783 540 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 MAP3K14Q99558 947 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 TRIM34Q9BYJ4 488 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 RBM28Q9NW13 759 aaKnown RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 FAM198AQ9UFP1 575 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 LETM1O95202 739 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 YEATS4O95619 227 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ADCY5O95622 1261 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 PARP1P09874 1014 aaKnown RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 PCP11498 1178 aaKnown RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 TAL1P17542 331 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 CASP1P29466 404 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SYKP43405 635 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ZNF165P49910 485 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 PTPAQ15257 358 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CCDC96Q2M329 555 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 HSP90AA4PQ58FG1 418 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 C11orf57Q6ZUT1 292 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 SH3BP5LQ7L8J4 393 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CCDC84Q86UT8 332 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 FMR1NBQ8N0W7 255 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 SPICE1Q8N0Z3 855 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ENGASEQ8NFI3 743 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 NEDD1Q8NHV4 660 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 COA7Q96BR5 231 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 PIGSQ96S52 555 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 FUCA2Q9BTY2 467 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ZNF287Q9HBT7 754 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 DUOX1Q9NRD9 1551 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 HLA-DOAP06340 250 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SHMT1P34896 483 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 PNOCQ13519 176 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SEPT2Q15019 361 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ZYXQ15942 572 aaKnown RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CCDC93Q567U6 631 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 WWC2Q6AWC2 1192 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 EPSTI1Q96J88 318 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 PLIN2Q99541 437 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 NUP88Q99567 741 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 PHF20Q9BVI0 1012 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 DNAJC18Q9H819 358 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CBX8Q9HC52 389 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 STK36Q9NRP7 1315 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 VWA3AA6NCI4 1184 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 POLR2DO15514 142 aaKnown RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 NAPAP54920 295 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 JAG1P78504 1218 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 CCDC173Q0VFZ6 552 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 IKQ13123 557 aaPredicted RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 NPY5RQ15761 445 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 PFKFB3Q16875 520 aaPredicted RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 INF2Q27J81 1249 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 CERKLQ49MI3 558 aaPredicted RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 JAKMIP3Q5VZ66 844 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 HHIPL2Q6UWX4 724 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 OGFOD1Q8N543 542 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 ZDHHC15Q96MV8 337 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 MTA3Q9BTC8 594 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 CSRNP2Q9H175 543 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 FOXP1Q9H334 677 aaPredicted RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 MTMR4Q9NYA4 1195 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 BIN2Q9UBW5 565 aaPredicted RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 GJA3Q9Y6H8 435 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 TRIM75PA6NK02 468 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 EGFRP00533 1210 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 TOP1P11387 765 aaKnown RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 CMA1P23946 247 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 AFMP43652 599 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 PTGDRQ13258 359 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 GRM4Q14833 912 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 PTPN21Q16825 1174 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 RILPL1Q5EBL4 403 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 ATL3Q6DD88 541 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 DRC7Q8IY82 874 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 KRI1Q8N9T8 703 aaKnown RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 CNNM3Q8NE01 707 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 DHX58Q96C10 678 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 CSRNP1Q96S65 589 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms