RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 ASCC2Q9H1I8 757 aaPredicted RBP27.23■■□□□ 1.95
SNX5-217ENST00000606557 CNNM2Q9H8M5 875 aa27.23■■□□□ 1.95
SNX5-217ENST00000606557 PRDM10Q9NQV6 1147 aa27.23■■□□□ 1.95
SNX5-217ENST00000606557 TCP11L1Q9NUJ3 509 aa27.23■■□□□ 1.95
SNX5-217ENST00000606557 MGAMO43451 1857 aa27.23■■□□□ 1.95
SNX5-217ENST00000606557 B4E1Z4 1266 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 NOVP48745 357 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 NECTIN1Q15223 517 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 PPP4R3BQ5MIZ7 849 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 KRT23Q9C075 422 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 GOPCQ9HD26 462 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 SYNPO2Q9UMS6 1093 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 ZSWIM8A7E2V4 1837 aa27.22■■□□□ 1.95
SNX5-217ENST00000606557 A0A0G2JMZ2 1700 aa27.21■■□□□ 1.95
SNX5-217ENST00000606557 KDM4AO75164 1064 aa27.21■■□□□ 1.95
SNX5-217ENST00000606557 OSBPP22059 807 aa27.21■■□□□ 1.95
SNX5-217ENST00000606557 SPICE1Q8N0Z3 855 aa27.21■■□□□ 1.95
SNX5-217ENST00000606557 ZNF296Q8WUU4 475 aaPredicted RBP27.21■■□□□ 1.95
SNX5-217ENST00000606557 RPAP3Q9H6T3 665 aaPredicted RBP27.21■■□□□ 1.95
SNX5-217ENST00000606557 USP17L15C9J2P7 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L13C9JLJ4 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L11C9JVI0 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L18D6R9N7 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L22D6RA61 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L17D6RBQ6 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L19D6RCP7 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L20D6RJB6 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 E7EWF7 191 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 SLC27A2O14975 620 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 IRX3P78415 501 aaPredicted RBP27.2■■□□□ 1.94
SNX5-217ENST00000606557 USP17L24Q0WX57 530 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 CREB3L3Q68CJ9 461 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 C17orf99Q6UX52 265 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 STOX1Q6ZVD7 989 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 LRRC47Q8N1G4 583 aaKnown RBP27.2■■□□□ 1.94
SNX5-217ENST00000606557 SMCR8Q8TEV9 937 aaPredicted RBP27.2■■□□□ 1.94
SNX5-217ENST00000606557 STX8Q9UNK0 236 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 GTF3C3Q9Y5Q9 886 aa27.2■■□□□ 1.94
SNX5-217ENST00000606557 WDR46O15213 610 aaKnown RBP27.19■■□□□ 1.94
SNX5-217ENST00000606557 CATSPERGQ6ZRH7 1159 aa27.19■■□□□ 1.94
SNX5-217ENST00000606557 CPA4Q9UI42 421 aa27.19■■□□□ 1.94
SNX5-217ENST00000606557 COL11A1P12107 1806 aaPredicted RBP27.18■■□□□ 1.94
SNX5-217ENST00000606557 FKTNO75072 461 aa27.18■■□□□ 1.94
SNX5-217ENST00000606557 GMCL1P1Q8NEA9 526 aa27.18■■□□□ 1.94
SNX5-217ENST00000606557 ZSWIM5Q9P217 1185 aa27.18■■□□□ 1.94
SNX5-217ENST00000606557 F5H6K3 240 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 REC8O95072 547 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 NDUFB10O96000 172 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 BCRP11274 1271 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 KLRC3Q07444 240 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 TRDNQ13061 729 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 RCSD1Q6JBY9 416 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 P2RX7Q99572 595 aaKnown RBP27.17■■□□□ 1.94
SNX5-217ENST00000606557 ZKSCAN3Q9BRR0 538 aa27.17■■□□□ 1.94
SNX5-217ENST00000606557 RAD21O60216 631 aa27.16■■□□□ 1.94
SNX5-217ENST00000606557 HERVK_113P62684 666 aa27.16■■□□□ 1.94
SNX5-217ENST00000606557 SP3Q02447 781 aa27.16■■□□□ 1.94
SNX5-217ENST00000606557 IQCA1Q86XH1 822 aa27.16■■□□□ 1.94
SNX5-217ENST00000606557 NCOA7Q8NI08 942 aa27.16■■□□□ 1.94
SNX5-217ENST00000606557 TANGO6Q9C0B7 1094 aa27.16■■□□□ 1.94
SNX5-217ENST00000606557 GCLCP48506 637 aaPredicted RBP27.15■■□□□ 1.94
SNX5-217ENST00000606557 CYB5R4Q7L1T6 521 aa27.15■■□□□ 1.94
SNX5-217ENST00000606557 TTC14Q96N46 770 aa27.15■■□□□ 1.94
SNX5-217ENST00000606557 TOP1P11387 765 aaKnown RBP27.14■■□□□ 1.94
SNX5-217ENST00000606557 CCDC178Q5BJE1 867 aa27.14■■□□□ 1.94
SNX5-217ENST00000606557 FAM83BQ5T0W9 1011 aa27.14■■□□□ 1.94
SNX5-217ENST00000606557 RNF20Q5VTR2 975 aa27.14■■□□□ 1.94
SNX5-217ENST00000606557 RALYLQ86SE5 291 aaKnown RBP27.14■■□□□ 1.94
SNX5-217ENST00000606557 ZSCAN10Q96SZ4 725 aaPredicted RBP27.14■■□□□ 1.94
SNX5-217ENST00000606557 TMEM47Q9BQJ4 181 aa27.14■■□□□ 1.94
SNX5-217ENST00000606557 POTEEQ6S8J3 1075 aa27.13■■□□□ 1.93
SNX5-217ENST00000606557 MB21D2Q8IYB1 491 aaPredicted RBP27.13■■□□□ 1.93
SNX5-217ENST00000606557 ANKRD13CQ8N6S4 541 aa27.13■■□□□ 1.93
SNX5-217ENST00000606557 NUP88Q99567 741 aaPredicted RBP27.13■■□□□ 1.93
SNX5-217ENST00000606557 TNKSO95271 1327 aa27.13■■□□□ 1.93
SNX5-217ENST00000606557 SPDYE16A6NNV3 312 aaPredicted RBP27.12■■□□□ 1.93
SNX5-217ENST00000606557 FAM110CQ1W6H9 321 aa27.12■■□□□ 1.93
SNX5-217ENST00000606557 SLFN13Q68D06 897 aa27.12■■□□□ 1.93
SNX5-217ENST00000606557 LBX2Q6XYB7 198 aa27.12■■□□□ 1.93
SNX5-217ENST00000606557 DGKHQ86XP1 1220 aa27.12■■□□□ 1.93
SNX5-217ENST00000606557 ENAHQ8N8S7 591 aaPredicted RBP27.12■■□□□ 1.93
SNX5-217ENST00000606557 CD99L2Q8TCZ2 262 aa27.12■■□□□ 1.93
SNX5-217ENST00000606557 GTF3C2Q8WUA4 911 aaPredicted RBP27.12■■□□□ 1.93
SNX5-217ENST00000606557 ERO1AQ96HE7 468 aa27.12■■□□□ 1.93
SNX5-217ENST00000606557 UBAC1Q9BSL1 405 aa27.12■■□□□ 1.93
SNX5-217ENST00000606557 EPB41L2O43491 1005 aaKnown RBP27.11■■□□□ 1.93
SNX5-217ENST00000606557 FLOT1O75955 427 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 LACTBP83111 547 aaPredicted RBP27.11■■□□□ 1.93
SNX5-217ENST00000606557 CAP1Q01518 475 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 COG2Q14746 738 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 RASEFQ8IZ41 740 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 ANKS1AQ92625 1134 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 GMCL1Q96IK5 515 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 MORF4L1Q9UBU8 362 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 MYPNQ86TC9 1320 aa27.11■■□□□ 1.93
SNX5-217ENST00000606557 HSPA4P34932 840 aa27.1■■□□□ 1.93
SNX5-217ENST00000606557 ANTXR2P58335 489 aa27.1■■□□□ 1.93
SNX5-217ENST00000606557 TSGA10IPQ3SY00 556 aa27.1■■□□□ 1.93
SNX5-217ENST00000606557 RASGRP2Q7LDG7 609 aa27.1■■□□□ 1.93
SNX5-217ENST00000606557 KCNB2Q92953 911 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms