RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 DDAH1O94760 285 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 VEGFAP15692 232 aaPredicted RBP22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 CASQ1P31415 396 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 NSUN4Q96CB9 384 aaKnown RBP22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 CDCA7Q9BWT1 371 aaPredicted RBP22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 CASZ1Q86V15 1759 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 GOLGA6L9A6NEM1 432 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 ADAMTS3O15072 1205 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 COBLO75128 1261 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 MECOMQ03112 1051 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 KARSQ15046 597 aaKnown RBP22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 SMIM5Q71RC9 77 aa22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.99■■□□□ 1.27
SHKBP1-225ENST00000600733 PPP1R3GB7ZBB8 358 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 AKR1B15C9JRZ8 316 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 BMP15O95972 392 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 KCNQ4P56696 695 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 ATP2C1P98194 919 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 CPLX3Q8WVH0 158 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 GSDMAQ96QA5 445 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 MRPL44Q9H9J2 332 aaKnown RBP22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 FHOD1Q9Y613 1164 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 CYP2D6P10635 497 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 RBL2Q08999 1139 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 CDKAL1Q5VV42 579 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 PIK3AP1Q6ZUJ8 805 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 IGSF22Q8N9C0 903 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 CTCFLQ8NI51 663 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 EPC1Q9H2F5 836 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 BLZF1Q9H2G9 400 aa22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 DCP1AQ9NPI6 582 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 ADD3Q9UEY8 706 aaKnown RBP22.98■■□□□ 1.27
SHKBP1-225ENST00000600733 XDHP47989 1333 aa22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 EFCAB8A8MWE9 144 aa22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 PCP11498 1178 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 SLC4A8Q2Y0W8 1093 aa22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 CLEC4GQ6UXB4 293 aa22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 KIFC2Q96AC6 838 aa22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 MAP3K9P80192 1104 aa22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 IRX2Q9BZI1 471 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 TFCP2L1Q9NZI6 479 aa22.97■■□□□ 1.27
SHKBP1-225ENST00000600733 KIF20AO95235 890 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 GTF2E1P29083 439 aaPredicted RBP22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 PRDX5P30044 214 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 MCM7P33993 719 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 NLRP5P59047 1200 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 BMS1Q14692 1282 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 CT47A1Q5JQC4 288 aaPredicted RBP22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 ZNF771Q7L3S4 317 aaPredicted RBP22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 FBXO33Q7Z6M2 555 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 PANX2Q96RD6 677 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 CTNND2Q9UQB3 1225 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 SCG2P13521 617 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 PBX1P40424 430 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 E2F4Q16254 413 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 IL17AQ16552 155 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 JAG2Q9Y219 1238 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 MRFAP1Q9Y605 127 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 ROBO1Q9Y6N7 1651 aa22.96■■□□□ 1.27
SHKBP1-225ENST00000600733 A0A0U1RQJ8 604 aa22.95■■□□□ 1.26
SHKBP1-225ENST00000600733 ORC4O43929 436 aa22.95■■□□□ 1.26
SHKBP1-225ENST00000600733 RAD9BQ6WBX8 426 aa22.95■■□□□ 1.26
SHKBP1-225ENST00000600733 PPFIBP1Q86W92 1011 aa22.95■■□□□ 1.26
SHKBP1-225ENST00000600733 LINC00116Q8NCU8 138 aa22.95■■□□□ 1.26
SHKBP1-225ENST00000600733 ATRIPQ8WXE1 791 aa22.95■■□□□ 1.26
SHKBP1-225ENST00000600733 COL22A1Q8NFW1 1626 aaPredicted RBP22.95■■□□□ 1.26
SHKBP1-225ENST00000600733 PNMA6AP0CW24 399 aaPredicted RBP22.94■■□□□ 1.26
SHKBP1-225ENST00000600733 TERF2Q15554 542 aa22.94■■□□□ 1.26
SHKBP1-225ENST00000600733 MTRQ99707 1265 aa22.94■■□□□ 1.26
SHKBP1-225ENST00000600733 CRNKL1Q9BZJ0 848 aaKnown RBP22.94■■□□□ 1.26
SHKBP1-225ENST00000600733 CCDC175P0C221 793 aa22.94■■□□□ 1.26
SHKBP1-225ENST00000600733 LZTFL1Q9NQ48 299 aa22.94■■□□□ 1.26
SHKBP1-225ENST00000600733 THRAP3Q9Y2W1 955 aaKnown RBP22.94■■□□□ 1.26
SHKBP1-225ENST00000600733 CCT6AP40227 531 aaKnown RBP22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 PPP2R3AQ06190 1150 aa22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 TBC1D9BQ66K14 1250 aa22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 IQUBQ8NA54 791 aa22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 ARGLU1Q9NWB6 273 aaPredicted RBP22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 COL5A3P25940 1745 aaPredicted RBP22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 ZRANB2O95218 330 aaKnown RBP eCLIP22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 PFKFB3Q16875 520 aaPredicted RBP22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 PDXDC2PQ6P474 469 aa22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 CTAGE1Q96RT6 745 aa22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 ADGRG1Q9Y653 693 aa22.93■■□□□ 1.26
SHKBP1-225ENST00000600733 TSPY2A6NKD2 308 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 CDC25AP30304 524 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 CASP14P31944 242 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 TMCO3Q6UWJ1 677 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 CCDC24Q8N4L8 307 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 CCDC12Q8WUD4 166 aaPredicted RBP22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 LAMB1P07942 1786 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 MFAP3LO75121 409 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 SEC31AO94979 1220 aaKnown RBP22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 GYPCP04921 128 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 RRAGBQ5VZM2 374 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 RCSD1Q6JBY9 416 aa22.92■■□□□ 1.26
SHKBP1-225ENST00000600733 SEMA3EO15041 775 aa22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 HIBADHP31937 336 aaKnown RBP22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 FXR1P51114 621 aaKnown RBP eCLIP22.91■■□□□ 1.26
SHKBP1-225ENST00000600733 RPS8P62241 208 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms