RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TICAM2Q86XR7 235 aa26.65■■□□□ 1.86
GTF2F1-204ENST00000594965 PAGR1Q9BTK6 254 aa26.65■■□□□ 1.86
GTF2F1-204ENST00000594965 NAPBQ9H115 298 aa26.65■■□□□ 1.86
GTF2F1-204ENST00000594965 VCPKMTQ9H867 229 aa26.65■■□□□ 1.86
GTF2F1-204ENST00000594965 KANSL2Q9H9L4 492 aa26.65■■□□□ 1.86
GTF2F1-204ENST00000594965 MKNK2Q9HBH9 465 aa26.65■■□□□ 1.86
GTF2F1-204ENST00000594965 GJD2Q9UKL4 321 aa26.65■■□□□ 1.86
GTF2F1-204ENST00000594965 SPDYE16A6NNV3 312 aaPredicted RBP26.64■■□□□ 1.86
GTF2F1-204ENST00000594965 PDE4AP27815 886 aa26.64■■□□□ 1.86
GTF2F1-204ENST00000594965 MTFR1Q15390 333 aa26.64■■□□□ 1.86
GTF2F1-204ENST00000594965 LBX2Q6XYB7 198 aa26.64■■□□□ 1.86
GTF2F1-204ENST00000594965 RILPL2Q969X0 211 aa26.64■■□□□ 1.86
GTF2F1-204ENST00000594965 COL11A1P12107 1806 aaPredicted RBP26.64■■□□□ 1.85
GTF2F1-204ENST00000594965 PRDM1O75626 825 aa26.63■■□□□ 1.85
GTF2F1-204ENST00000594965 PPARAQ07869 468 aa26.63■■□□□ 1.85
GTF2F1-204ENST00000594965 NMIQ13287 307 aaPredicted RBP26.63■■□□□ 1.85
GTF2F1-204ENST00000594965 MCMDC2Q4G0Z9 681 aa26.63■■□□□ 1.85
GTF2F1-204ENST00000594965 SLAIN1Q8ND83 568 aa26.63■■□□□ 1.85
GTF2F1-204ENST00000594965 PORCNQ9H237 461 aa26.63■■□□□ 1.85
GTF2F1-204ENST00000594965 RABGAP1Q9Y3P9 1069 aa26.63■■□□□ 1.85
GTF2F1-204ENST00000594965 IGKV6D-41A0A0C4DH26 115 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 ADCY3O60266 1144 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 SPICE1Q8N0Z3 855 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 PXYLP1Q8TE99 480 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 LPAR1Q92633 364 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 TMEM106CQ9BVX2 250 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 SH2D4AQ9H788 454 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 BTBD7Q9P203 1132 aa26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 TNRC18O15417 2968 aaPredicted RBP26.62■■□□□ 1.85
GTF2F1-204ENST00000594965 ELNP15502 786 aa26.61■■□□□ 1.85
GTF2F1-204ENST00000594965 EN2P19622 333 aaPredicted RBP26.61■■□□□ 1.85
GTF2F1-204ENST00000594965 ZNF589Q86UQ0 364 aaPredicted RBP26.61■■□□□ 1.85
GTF2F1-204ENST00000594965 SDSP20132 328 aa26.6■■□□□ 1.85
GTF2F1-204ENST00000594965 ATP2B2Q01814 1243 aa26.6■■□□□ 1.85
GTF2F1-204ENST00000594965 COG2Q14746 738 aa26.6■■□□□ 1.85
GTF2F1-204ENST00000594965 TACC3Q9Y6A5 838 aa26.6■■□□□ 1.85
GTF2F1-204ENST00000594965 BRCA2P51587 3418 aa26.6■■□□□ 1.85
GTF2F1-204ENST00000594965 ALX1Q15699 326 aa26.59■■□□□ 1.85
GTF2F1-204ENST00000594965 ZNF444Q8N0Y2 327 aaPredicted RBP26.59■■□□□ 1.85
GTF2F1-204ENST00000594965 TANGO6Q9C0B7 1094 aa26.59■■□□□ 1.85
GTF2F1-204ENST00000594965 ZNF287Q9HBT7 754 aa26.59■■□□□ 1.85
GTF2F1-204ENST00000594965 NYAP2Q9P242 653 aa26.59■■□□□ 1.85
GTF2F1-204ENST00000594965 WDR46O15213 610 aaKnown RBP26.58■■□□□ 1.85
GTF2F1-204ENST00000594965 MAPK4P31152 587 aa26.58■■□□□ 1.85
GTF2F1-204ENST00000594965 INCENPQ9NQS7 918 aa26.58■■□□□ 1.85
GTF2F1-204ENST00000594965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.58■■□□□ 1.85
GTF2F1-204ENST00000594965 PLIN4Q96Q06 1357 aa26.58■■□□□ 1.84
GTF2F1-204ENST00000594965 HSPD1P10809 573 aaKnown RBP26.57■■□□□ 1.84
GTF2F1-204ENST00000594965 DSG3P32926 999 aa26.57■■□□□ 1.84
GTF2F1-204ENST00000594965 CTDSPL2Q05D32 466 aa26.57■■□□□ 1.84
GTF2F1-204ENST00000594965 PDE4BQ07343 736 aa26.57■■□□□ 1.84
GTF2F1-204ENST00000594965 GPR142Q7Z601 462 aa26.57■■□□□ 1.84
GTF2F1-204ENST00000594965 HOXC10Q9NYD6 342 aa26.57■■□□□ 1.84
GTF2F1-204ENST00000594965 BIN2Q9UBW5 565 aaPredicted RBP26.57■■□□□ 1.84
GTF2F1-204ENST00000594965 FGAP02671 866 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 INHAP05111 366 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 SLC3A2P08195 630 aaKnown RBP26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 CCL5P13501 91 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 UBXN2AP68543 259 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 FAM47AQ5JRC9 791 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 MORN1Q5T089 497 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 NEDD1Q8NHV4 660 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 USP6NLQ92738 828 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 CEP95Q96GE4 821 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 GOPCQ9HD26 462 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 ANAPC4Q9UJX5 808 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 CCDC171Q6TFL3 1326 aa26.56■■□□□ 1.84
GTF2F1-204ENST00000594965 FLOT1O75955 427 aa26.55■■□□□ 1.84
GTF2F1-204ENST00000594965 PLEKHH3Q7Z736 793 aa26.55■■□□□ 1.84
GTF2F1-204ENST00000594965 UNC93B1Q9H1C4 597 aa26.55■■□□□ 1.84
GTF2F1-204ENST00000594965 MTMR4Q9NYA4 1195 aa26.55■■□□□ 1.84
GTF2F1-204ENST00000594965 LAMA4Q16363 1823 aa26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 CYP2B6P20813 491 aa26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 CCNA1P78396 465 aa26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 MKL1Q969V6 931 aa26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 ATG4CQ96DT6 458 aa26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 NUDT12Q9BQG2 462 aa26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 CLIP2Q9UDT6 1046 aa26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 ZNFX1Q9P2E3 1918 aaKnown RBP26.54■■□□□ 1.84
GTF2F1-204ENST00000594965 FGRP09769 529 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 TSPY3P0CV98 308 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 TSPY8P0CW00 308 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 GSPT1P15170 499 aaKnown RBP26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 TFAP4Q01664 338 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 CCAR1Q8IX12 1150 aaKnown RBP26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 SOCS4Q8WXH5 440 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 SHISA4Q96DD7 197 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 RNF208Q9H0X6 261 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 FBXO28Q9NVF7 368 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 ADAMTS5Q9UNA0 930 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 ZMYM6O95789 1325 aa26.53■■□□□ 1.84
GTF2F1-204ENST00000594965 F5H6K3 240 aa26.52■■□□□ 1.84
GTF2F1-204ENST00000594965 KLRC3Q07444 240 aa26.52■■□□□ 1.84
GTF2F1-204ENST00000594965 FAM83BQ5T0W9 1011 aa26.52■■□□□ 1.84
GTF2F1-204ENST00000594965 TTC22Q5TAA0 569 aa26.52■■□□□ 1.84
GTF2F1-204ENST00000594965 CWC27Q6UX04 472 aaKnown RBP26.52■■□□□ 1.84
GTF2F1-204ENST00000594965 TRIB2Q92519 343 aa26.52■■□□□ 1.84
GTF2F1-204ENST00000594965 MOV10L1Q9BXT6 1211 aaKnown RBP26.52■■□□□ 1.84
GTF2F1-204ENST00000594965 ZNF236Q9UL36 1845 aa26.51■■□□□ 1.83
GTF2F1-204ENST00000594965 RAD21O60216 631 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms