RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 CRHR2Q13324 411 aa16.61■□□□□ 0.25
MBD1-225ENST00000591535 LRRC47Q8N1G4 583 aaKnown RBP16.61■□□□□ 0.25
MBD1-225ENST00000591535 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
MBD1-225ENST00000591535 PNMA3Q9UL41 463 aa16.61■□□□□ 0.25
MBD1-225ENST00000591535 CYP2C8P10632 490 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 VCAM1P19320 739 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
MBD1-225ENST00000591535 MKL1Q969V6 931 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 C12orf42Q96LP6 360 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 PARK7Q99497 189 aaKnown RBP16.6■□□□□ 0.25
MBD1-225ENST00000591535 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 TCP11L1Q9NUJ3 509 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 SLC45A1Q9Y2W3 748 aa16.6■□□□□ 0.25
MBD1-225ENST00000591535 F5H6K3 240 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
MBD1-225ENST00000591535 CTCFP49711 727 aaPredicted RBP16.59■□□□□ 0.25
MBD1-225ENST00000591535 IRX3P78415 501 aaPredicted RBP16.59■□□□□ 0.25
MBD1-225ENST00000591535 KLRC3Q07444 240 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 CCDC178Q5BJE1 867 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 LPAR1Q92633 364 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 ZSCAN10Q96SZ4 725 aaPredicted RBP16.59■□□□□ 0.25
MBD1-225ENST00000591535 TANGO6Q9C0B7 1094 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 R3HDMLQ9H3Y0 253 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 RPAP3Q9H6T3 665 aaPredicted RBP16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L15C9J2P7 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L13C9JLJ4 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L11C9JVI0 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L18D6R9N7 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L22D6RA61 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L17D6RBQ6 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L19D6RCP7 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 ASCC2Q9H1I8 757 aaPredicted RBP16.59■□□□□ 0.25
MBD1-225ENST00000591535 ISY1Q9ULR0 285 aaKnown RBP16.59■□□□□ 0.25
MBD1-225ENST00000591535 MTMR7Q9Y216 660 aa16.59■□□□□ 0.25
MBD1-225ENST00000591535 TOP1P11387 765 aaKnown RBP16.58■□□□□ 0.24
MBD1-225ENST00000591535 MCCP23508 829 aa16.58■□□□□ 0.24
MBD1-225ENST00000591535 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
MBD1-225ENST00000591535 KIAA1755Q5JYT7 1200 aa16.58■□□□□ 0.24
MBD1-225ENST00000591535 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
MBD1-225ENST00000591535 CYB5R4Q7L1T6 521 aa16.58■□□□□ 0.24
MBD1-225ENST00000591535 CHST3Q7LGC8 479 aa16.58■□□□□ 0.24
MBD1-225ENST00000591535 TTC14Q96N46 770 aa16.58■□□□□ 0.24
MBD1-225ENST00000591535 USP26Q9BXU7 913 aa16.58■□□□□ 0.24
MBD1-225ENST00000591535 TNKSO95271 1327 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 ERICH2A1L162 156 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 WDR46O15213 610 aaKnown RBP16.57■□□□□ 0.24
MBD1-225ENST00000591535 TLR2O60603 784 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 NDUFB10O96000 172 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 HSPA8P11142 646 aaKnown RBP16.57■□□□□ 0.24
MBD1-225ENST00000591535 HSPA4P34932 840 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 LBX1P52954 281 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 KRT32Q14532 448 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 SART3Q15020 963 aaKnown RBP16.57■□□□□ 0.24
MBD1-225ENST00000591535 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 DGKHQ86XP1 1220 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 TMEM47Q9BQJ4 181 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 CFHR5Q9BXR6 569 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 CPA4Q9UI42 421 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
MBD1-225ENST00000591535 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
MBD1-225ENST00000591535 EPB41L2O43491 1005 aaKnown RBP16.56■□□□□ 0.24
MBD1-225ENST00000591535 CATSPERGQ6ZRH7 1159 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 NUP88Q99567 741 aaPredicted RBP16.56■□□□□ 0.24
MBD1-225ENST00000591535 P2RX7Q99572 595 aaKnown RBP16.56■□□□□ 0.24
MBD1-225ENST00000591535 GPR25O00155 361 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 FLOT1O75955 427 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 MCM5P33992 734 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 FAM83BQ5T0W9 1011 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
MBD1-225ENST00000591535 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 MB21D2Q8IYB1 491 aaPredicted RBP16.56■□□□□ 0.24
MBD1-225ENST00000591535 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
MBD1-225ENST00000591535 GMCL1P1Q8NEA9 526 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 KAT14Q9H8E8 782 aa16.56■□□□□ 0.24
MBD1-225ENST00000591535 PRC1O43663 620 aa16.55■□□□□ 0.24
MBD1-225ENST00000591535 SLC1A4P43007 532 aa16.55■□□□□ 0.24
MBD1-225ENST00000591535 NOVP48745 357 aa16.55■□□□□ 0.24
MBD1-225ENST00000591535 HERVK_113P62684 666 aa16.55■□□□□ 0.24
MBD1-225ENST00000591535 COG2Q14746 738 aa16.55■□□□□ 0.24
MBD1-225ENST00000591535 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
MBD1-225ENST00000591535 SEC24BO95487 1268 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 BMP3P12645 472 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 ADCK5Q3MIX3 580 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 JAKMIP1Q96N16 626 aaKnown RBP16.54■□□□□ 0.24
MBD1-225ENST00000591535 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
MBD1-225ENST00000591535 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
MBD1-225ENST00000591535 FKTNO75072 461 aa16.53■□□□□ 0.24
MBD1-225ENST00000591535 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
MBD1-225ENST00000591535 SP3Q02447 781 aa16.53■□□□□ 0.24
MBD1-225ENST00000591535 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms