RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 ZNF287Q9HBT7 754 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 RBBP6Q7Z6E9 1792 aaKnown RBP17.27■□□□□ 0.35
CACTIN-206ENST00000588749 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
CACTIN-206ENST00000588749 SLC3A2P08195 630 aaKnown RBP17.26■□□□□ 0.35
CACTIN-206ENST00000588749 GRK4P32298 578 aa17.26■□□□□ 0.35
CACTIN-206ENST00000588749 ERVK-9P63128 1117 aa17.26■□□□□ 0.35
CACTIN-206ENST00000588749 ERVK-24P63145 666 aa17.26■□□□□ 0.35
CACTIN-206ENST00000588749 POTEEQ6S8J3 1075 aa17.26■□□□□ 0.35
CACTIN-206ENST00000588749 ZNF589Q86UQ0 364 aaPredicted RBP17.26■□□□□ 0.35
CACTIN-206ENST00000588749 LPAR1Q92633 364 aa17.26■□□□□ 0.35
CACTIN-206ENST00000588749 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
CACTIN-206ENST00000588749 POTEFA5A3E0 1075 aa17.25■□□□□ 0.35
CACTIN-206ENST00000588749 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
CACTIN-206ENST00000588749 SDSP20132 328 aa17.25■□□□□ 0.35
CACTIN-206ENST00000588749 PDE4BQ07343 736 aa17.25■□□□□ 0.35
CACTIN-206ENST00000588749 ZNF444Q8N0Y2 327 aaPredicted RBP17.25■□□□□ 0.35
CACTIN-206ENST00000588749 SLAIN1Q8ND83 568 aa17.25■□□□□ 0.35
CACTIN-206ENST00000588749 TMEM106CQ9BVX2 250 aa17.25■□□□□ 0.35
CACTIN-206ENST00000588749 BIN2Q9UBW5 565 aaPredicted RBP17.25■□□□□ 0.35
CACTIN-206ENST00000588749 CCDC171Q6TFL3 1326 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 RLFQ13129 1914 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 MYH4Q9Y623 1939 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 RAD21O60216 631 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 ADCY3O60266 1144 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 ELNP15502 786 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 IRF5Q13568 498 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 Q3C1V9 767 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 CCAR1Q8IX12 1150 aaKnown RBP17.24■□□□□ 0.35
CACTIN-206ENST00000588749 PORCNQ9H237 461 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 DIAPH3Q9NSV4 1193 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
CACTIN-206ENST00000588749 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
CACTIN-206ENST00000588749 CNMDO75829 334 aa17.23■□□□□ 0.35
CACTIN-206ENST00000588749 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
CACTIN-206ENST00000588749 CTDSPL2Q05D32 466 aa17.23■□□□□ 0.35
CACTIN-206ENST00000588749 COG2Q14746 738 aa17.23■□□□□ 0.35
CACTIN-206ENST00000588749 LBX2Q6XYB7 198 aa17.23■□□□□ 0.35
CACTIN-206ENST00000588749 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
CACTIN-206ENST00000588749 PLXNB2O15031 1838 aa17.23■□□□□ 0.35
CACTIN-206ENST00000588749 PARP14Q460N5 1801 aa17.23■□□□□ 0.35
CACTIN-206ENST00000588749 A0A0G2JMZ2 1700 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 IGKV6D-41A0A0C4DH26 115 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 FLOT1O75955 427 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 TSPY3P0CV98 308 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 TSPY8P0CW00 308 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 MAPK4P31152 587 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 MTFR1Q15390 333 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 ALX1Q15699 326 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 FAM47AQ5JRC9 791 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
CACTIN-206ENST00000588749 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
CACTIN-206ENST00000588749 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 CWC22Q9HCG8 908 aaKnown RBP17.22■□□□□ 0.35
CACTIN-206ENST00000588749 HOXC10Q9NYD6 342 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 NYAP2Q9P242 653 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
CACTIN-206ENST00000588749 PLIN4Q96Q06 1357 aa17.22■□□□□ 0.35
CACTIN-206ENST00000588749 HIP1O00291 1037 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 FGAP02671 866 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 GSPT1P15170 499 aaKnown RBP17.21■□□□□ 0.35
CACTIN-206ENST00000588749 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
CACTIN-206ENST00000588749 UBXN2AP68543 259 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 CCNA1P78396 465 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 TFAP4Q01664 338 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 NEDD1Q8NHV4 660 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 PXYLP1Q8TE99 480 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 CLIP2Q9UDT6 1046 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 ANAPC4Q9UJX5 808 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
CACTIN-206ENST00000588749 INHAP05111 366 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 EN2P19622 333 aaPredicted RBP17.2■□□□□ 0.34
CACTIN-206ENST00000588749 DSG3P32926 999 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 GPR142Q7Z601 462 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 PLEKHH3Q7Z736 793 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 SOCS4Q8WXH5 440 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 FBXO28Q9NVF7 368 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 MTMR4Q9NYA4 1195 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 ZMYM6O95789 1325 aa17.2■□□□□ 0.34
CACTIN-206ENST00000588749 BRCA2P51587 3418 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 TSPY2A6NKD2 308 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 F5H6K3 240 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 TTLL1O95922 423 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 NDUFB10O96000 172 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 CCL5P13501 91 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 CYP2B6P20813 491 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 HAND2P61296 217 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 KLRC3Q07444 240 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
CACTIN-206ENST00000588749 NUP88Q99567 741 aaPredicted RBP17.19■□□□□ 0.34
CACTIN-206ENST00000588749 TOMM22Q9NS69 142 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
CACTIN-206ENST00000588749 RANBP6O60518 1105 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms