RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 OSBPL3Q9H4L5 887 aa15.72■□□□□ 0.11
ERBB2-220ENST00000584684 VCPKMTQ9H867 229 aa15.72■□□□□ 0.11
ERBB2-220ENST00000584684 WDR46O15213 610 aaKnown RBP15.71■□□□□ 0.11
ERBB2-220ENST00000584684 FOXP2O15409 715 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 CNMDO75829 334 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 GJB1P08034 283 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 XRCC5P13010 732 aaKnown RBP15.71■□□□□ 0.11
ERBB2-220ENST00000584684 CCL5P13501 91 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 CAPN2P17655 700 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 EN2P19622 333 aaPredicted RBP15.71■□□□□ 0.11
ERBB2-220ENST00000584684 CCNA1P78396 465 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 MTFR1Q15390 333 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 NKX2-3Q8TAU0 364 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 PAGR1Q9BTK6 254 aa15.71■□□□□ 0.11
ERBB2-220ENST00000584684 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.11
ERBB2-220ENST00000584684 HMGCRP04035 888 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 APPP05067 770 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 INHAP05111 366 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
ERBB2-220ENST00000584684 ELNP15502 786 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 COG2Q14746 738 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 KIAA1755Q5JYT7 1200 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 MB21D1Q8N884 522 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 USP6NLQ92738 828 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 SHISA4Q96DD7 197 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 PORCNQ9H237 461 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 HELLSQ9NRZ9 838 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 BIN2Q9UBW5 565 aaPredicted RBP15.7■□□□□ 0.1
ERBB2-220ENST00000584684 SYNPO2Q9UMS6 1093 aa15.7■□□□□ 0.1
ERBB2-220ENST00000584684 ZMYM6O95789 1325 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 MYH4Q9Y623 1939 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 IGKV6D-41A0A0C4DH26 115 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 MINDY4BA8MYZ0 360 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 PEX10O60683 326 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 GJA8P48165 433 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 Q3C1V9 767 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 GPR142Q7Z601 462 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 PLEKHM2Q8IWE5 1019 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 NUDT12Q9BQG2 462 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 TANGO6Q9C0B7 1094 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 NAPBQ9H115 298 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 GOPCQ9HD26 462 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 PAK6Q9NQU5 681 aaPredicted RBP15.69■□□□□ 0.1
ERBB2-220ENST00000584684 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
ERBB2-220ENST00000584684 SLC3A2P08195 630 aaKnown RBP15.68■□□□□ 0.1
ERBB2-220ENST00000584684 PPARAQ07869 468 aa15.68■□□□□ 0.1
ERBB2-220ENST00000584684 MORN1Q5T089 497 aa15.68■□□□□ 0.1
ERBB2-220ENST00000584684 PLEKHH3Q7Z736 793 aa15.68■□□□□ 0.1
ERBB2-220ENST00000584684 TRMT44Q8IYL2 757 aaKnown RBP15.68■□□□□ 0.1
ERBB2-220ENST00000584684 APBA2Q99767 749 aa15.68■□□□□ 0.1
ERBB2-220ENST00000584684 RNF208Q9H0X6 261 aa15.68■□□□□ 0.1
ERBB2-220ENST00000584684 BTBD7Q9P203 1132 aa15.68■□□□□ 0.1
ERBB2-220ENST00000584684 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 MYCP01106 439 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-220ENST00000584684 DSG3P32926 999 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 PDE4BQ07343 736 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 ALX1Q15699 326 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 PRPF38BQ5VTL8 546 aaKnown RBP15.67■□□□□ 0.1
ERBB2-220ENST00000584684 B4GALNT3Q6L9W6 998 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 CCDC129Q6ZRS4 1044 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 UBE2Q1Q7Z7E8 422 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 CCAR1Q8IX12 1150 aaKnown RBP15.67■□□□□ 0.1
ERBB2-220ENST00000584684 SPICE1Q8N0Z3 855 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 SHCBP1Q8NEM2 672 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 UNC93B1Q9H1C4 597 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 ANAPC4Q9UJX5 808 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 CEP290O15078 2479 aa15.67■□□□□ 0.1
ERBB2-220ENST00000584684 COL11A1P12107 1806 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-220ENST00000584684 LAMA4Q16363 1823 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 SLC15A5A6NIM6 579 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 FLOT1O75955 427 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 RGS2P41220 211 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 MCMDC2Q4G0Z9 681 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 MAP3K21Q5TCX8 1036 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 U2AF1L4Q8WU68 220 aaKnown RBP15.66■□□□□ 0.1
ERBB2-220ENST00000584684 TRIB2Q92519 343 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 FAM227BQ96M60 508 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
ERBB2-220ENST00000584684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.66■□□□□ 0.1
ERBB2-220ENST00000584684 HOXC6P09630 235 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 ATP2B2Q01814 1243 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 MAP2K5Q13163 448 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 GRB14Q14449 540 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 PPP4R3BQ5MIZ7 849 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 ZNF444Q8N0Y2 327 aaPredicted RBP15.65■□□□□ 0.1
ERBB2-220ENST00000584684 NEDD1Q8NHV4 660 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 MKL1Q969V6 931 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 MOV10L1Q9BXT6 1211 aaKnown RBP15.65■□□□□ 0.1
ERBB2-220ENST00000584684 SPATC1LQ9H0A9 340 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 CRISPLD2Q9H0B8 497 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 MTMR4Q9NYA4 1195 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 CCDC171Q6TFL3 1326 aa15.65■□□□□ 0.1
ERBB2-220ENST00000584684 TRIM6-TRIM34B2RNG4 842 aa15.64■□□□□ 0.09
ERBB2-220ENST00000584684 PRDM1O75626 825 aa15.64■□□□□ 0.09
ERBB2-220ENST00000584684 SGPL1O95470 568 aa15.64■□□□□ 0.09
ERBB2-220ENST00000584684 TTLL1O95922 423 aa15.64■□□□□ 0.09
ERBB2-220ENST00000584684 FGRP09769 529 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms