RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 SPDYE16A6NNV3 312 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 PPARAQ07869 468 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 LBX2Q6XYB7 198 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 RABGAP1Q9Y3P9 1069 aa13.03□□□□□ -0.32
PPP4R1-208ENST00000578178 PDE4DIPQ5VU43 2346 aa13.02□□□□□ -0.32
PPP4R1-208ENST00000578178 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 ADCY3O60266 1144 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 PEX10O60683 326 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 MYCP01106 439 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 MAPK4P31152 587 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 UBXN2AP68543 259 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 ATP2B2Q01814 1243 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 PDE4BQ07343 736 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 NMIQ13287 307 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 MCMDC2Q4G0Z9 681 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 KIAA1755Q5JYT7 1200 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 SOCS4Q8WXH5 440 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 LAMA4Q16363 1823 aa13.02□□□□□ -0.33
PPP4R1-208ENST00000578178 BRCA2P51587 3418 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 PRDM1O75626 825 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 CNMDO75829 334 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 ELNP15502 786 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 CCNA1P78396 465 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 CCAR1Q8IX12 1150 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 SPICE1Q8N0Z3 855 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 PORCNQ9H237 461 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
PPP4R1-208ENST00000578178 ZNF236Q9UL36 1845 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 IGKV6D-41A0A0C4DH26 115 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 FLOT1O75955 427 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 INHAP05111 366 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 SDSP20132 328 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 COG2Q14746 738 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 MTFR1Q15390 333 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 ALX1Q15699 326 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 Q3C1V9 767 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 GPR142Q7Z601 462 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 BTBD7Q9P203 1132 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 NYAP2Q9P242 653 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 GJD2Q9UKL4 321 aa13□□□□□ -0.33
PPP4R1-208ENST00000578178 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 HIP1O00291 1037 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 HSPD1P10809 573 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 CCL5P13501 91 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 PDE4AP27815 886 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 PLEKHH3Q7Z736 793 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 MB21D1Q8N884 522 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 CEP95Q96GE4 821 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 NUDT12Q9BQG2 462 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 SYNPO2Q9UMS6 1093 aa12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
PPP4R1-208ENST00000578178 RAD21O60216 631 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 TTLL1O95922 423 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 HMGCRP04035 888 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 DSG3P32926 999 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 ATG4CQ96DT6 458 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 APBA2Q99767 749 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 MTMR4Q9NYA4 1195 aa12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
PPP4R1-208ENST00000578178 TSPY2A6NKD2 308 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 NDUFB10O96000 172 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 FGAP02671 866 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 GJB1P08034 283 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 CYP2B6P20813 491 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 RGS2P41220 211 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 TFAP4Q01664 338 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 FAM47AQ5JRC9 791 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 MORN1Q5T089 497 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 FAM83BQ5T0W9 1011 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 TTC22Q5TAA0 569 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 LRRC47Q8N1G4 583 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms