RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 PAGR1Q9BTK6 254 aa31.42■■■□□ 2.62
PPP4R1-204ENST00000577393 CCDC171Q6TFL3 1326 aa31.42■■■□□ 2.62
PPP4R1-204ENST00000577393 HSPD1P10809 573 aaKnown RBP31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 Q3C1V9 767 aa31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 SPICE1Q8N0Z3 855 aa31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 SH3TC2Q8TF17 1288 aa31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 COA7Q96BR5 231 aa31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 ZNF333Q96JL9 665 aa31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 DIAPH3Q9NSV4 1193 aa31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 GREB1LQ9C091 1923 aaPredicted RBP31.41■■■□□ 2.62
PPP4R1-204ENST00000577393 GSPT1P15170 499 aaKnown RBP31.4■■■□□ 2.62
PPP4R1-204ENST00000577393 ERVK-9P63128 1117 aa31.4■■■□□ 2.62
PPP4R1-204ENST00000577393 ERVK-24P63145 666 aa31.4■■■□□ 2.62
PPP4R1-204ENST00000577393 CTDSPL2Q05D32 466 aa31.4■■■□□ 2.62
PPP4R1-204ENST00000577393 CWC27Q6UX04 472 aaKnown RBP31.4■■■□□ 2.62
PPP4R1-204ENST00000577393 DOCK3Q8IZD9 2030 aa31.4■■■□□ 2.62
PPP4R1-204ENST00000577393 IGKV6D-41A0A0C4DH26 115 aa31.39■■■□□ 2.62
PPP4R1-204ENST00000577393 HIP1O00291 1037 aa31.39■■■□□ 2.62
PPP4R1-204ENST00000577393 FGAP02671 866 aa31.39■■■□□ 2.62
PPP4R1-204ENST00000577393 FLT3LGP49771 235 aa31.39■■■□□ 2.62
PPP4R1-204ENST00000577393 TANGO6Q9C0B7 1094 aa31.39■■■□□ 2.62
PPP4R1-204ENST00000577393 NYAP2Q9P242 653 aa31.39■■■□□ 2.62
PPP4R1-204ENST00000577393 RABGAP1Q9Y3P9 1069 aa31.39■■■□□ 2.62
PPP4R1-204ENST00000577393 SPDYE16A6NNV3 312 aaPredicted RBP31.38■■■□□ 2.61
PPP4R1-204ENST00000577393 MFAP1P55081 439 aaKnown RBP31.38■■■□□ 2.61
PPP4R1-204ENST00000577393 LBX2Q6XYB7 198 aa31.38■■■□□ 2.61
PPP4R1-204ENST00000577393 ANAPC4Q9UJX5 808 aa31.38■■■□□ 2.61
PPP4R1-204ENST00000577393 CNMDO75829 334 aa31.37■■■□□ 2.61
PPP4R1-204ENST00000577393 COG2Q14746 738 aa31.37■■■□□ 2.61
PPP4R1-204ENST00000577393 FAM47AQ5JRC9 791 aa31.37■■■□□ 2.61
PPP4R1-204ENST00000577393 GOPCQ9HD26 462 aa31.37■■■□□ 2.61
PPP4R1-204ENST00000577393 INCENPQ9NQS7 918 aa31.37■■■□□ 2.61
PPP4R1-204ENST00000577393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.37■■■□□ 2.61
PPP4R1-204ENST00000577393 WDR46O15213 610 aaKnown RBP31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 TSPY3P0CV98 308 aa31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 TSPY8P0CW00 308 aa31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 GRK4P32298 578 aa31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 TFAP4Q01664 338 aa31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 NEDD1Q8NHV4 660 aa31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 HOXC10Q9NYD6 342 aa31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 TACC3Q9Y6A5 838 aa31.36■■■□□ 2.61
PPP4R1-204ENST00000577393 IRF5Q13568 498 aa31.35■■■□□ 2.61
PPP4R1-204ENST00000577393 CEP95Q96GE4 821 aa31.35■■■□□ 2.61
PPP4R1-204ENST00000577393 PORCNQ9H237 461 aa31.35■■■□□ 2.61
PPP4R1-204ENST00000577393 MTMR4Q9NYA4 1195 aa31.35■■■□□ 2.61
PPP4R1-204ENST00000577393 CLIP2Q9UDT6 1046 aa31.35■■■□□ 2.61
PPP4R1-204ENST00000577393 PLIN4Q96Q06 1357 aa31.34■■■□□ 2.61
PPP4R1-204ENST00000577393 ZMYM6O95789 1325 aa31.34■■■□□ 2.61
PPP4R1-204ENST00000577393 RAD21O60216 631 aa31.34■■■□□ 2.61
PPP4R1-204ENST00000577393 MYCP01106 439 aaPredicted RBP31.34■■■□□ 2.61
PPP4R1-204ENST00000577393 BTBD7Q9P203 1132 aa31.34■■■□□ 2.61
PPP4R1-204ENST00000577393 GJD2Q9UKL4 321 aa31.34■■■□□ 2.61
PPP4R1-204ENST00000577393 ADCY3O60266 1144 aa31.33■■■□□ 2.61
PPP4R1-204ENST00000577393 FLOT1O75955 427 aa31.33■■■□□ 2.61
PPP4R1-204ENST00000577393 MAPK4P31152 587 aa31.33■■■□□ 2.61
PPP4R1-204ENST00000577393 CCAR1Q8IX12 1150 aaKnown RBP31.33■■■□□ 2.61
PPP4R1-204ENST00000577393 SLAIN1Q8ND83 568 aa31.33■■■□□ 2.61
PPP4R1-204ENST00000577393 POTEFA5A3E0 1075 aa31.32■■■□□ 2.6
PPP4R1-204ENST00000577393 DSG3P32926 999 aa31.32■■■□□ 2.6
PPP4R1-204ENST00000577393 MLLT1Q03111 559 aaPredicted RBP31.32■■■□□ 2.6
PPP4R1-204ENST00000577393 KIAA0100Q14667 2235 aaKnown RBP31.32■■■□□ 2.6
PPP4R1-204ENST00000577393 RLFQ13129 1914 aa31.32■■■□□ 2.6
PPP4R1-204ENST00000577393 TTLL1O95922 423 aa31.31■■■□□ 2.6
PPP4R1-204ENST00000577393 FGRP09769 529 aa31.31■■■□□ 2.6
PPP4R1-204ENST00000577393 CCNA1P78396 465 aa31.31■■■□□ 2.6
PPP4R1-204ENST00000577393 PXYLP1Q8TE99 480 aa31.31■■■□□ 2.6
PPP4R1-204ENST00000577393 MKL1Q969V6 931 aa31.31■■■□□ 2.6
PPP4R1-204ENST00000577393 TMEM106CQ9BVX2 250 aa31.31■■■□□ 2.6
PPP4R1-204ENST00000577393 BIN2Q9UBW5 565 aaPredicted RBP31.31■■■□□ 2.6
PPP4R1-204ENST00000577393 TSPY2A6NKD2 308 aa31.3■■■□□ 2.6
PPP4R1-204ENST00000577393 F5H6K3 240 aa31.3■■■□□ 2.6
PPP4R1-204ENST00000577393 ORC4O43929 436 aa31.3■■■□□ 2.6
PPP4R1-204ENST00000577393 ELNP15502 786 aa31.3■■■□□ 2.6
PPP4R1-204ENST00000577393 HAND2P61296 217 aa31.3■■■□□ 2.6
PPP4R1-204ENST00000577393 KLRC3Q07444 240 aa31.3■■■□□ 2.6
PPP4R1-204ENST00000577393 FAM83BQ5T0W9 1011 aa31.3■■■□□ 2.6
PPP4R1-204ENST00000577393 RANBP6O60518 1105 aaKnown RBP31.29■■■□□ 2.6
PPP4R1-204ENST00000577393 MTFR1Q15390 333 aa31.29■■■□□ 2.6
PPP4R1-204ENST00000577393 SAMD1Q6SPF0 538 aaPredicted RBP31.29■■■□□ 2.6
PPP4R1-204ENST00000577393 CENPQQ7L2Z9 268 aaPredicted RBP31.29■■■□□ 2.6
PPP4R1-204ENST00000577393 GPR142Q7Z601 462 aa31.29■■■□□ 2.6
PPP4R1-204ENST00000577393 ATG4CQ96DT6 458 aa31.29■■■□□ 2.6
PPP4R1-204ENST00000577393 NDUFB10O96000 172 aa31.28■■■□□ 2.6
PPP4R1-204ENST00000577393 PLEKHH3Q7Z736 793 aa31.28■■■□□ 2.6
PPP4R1-204ENST00000577393 NUP88Q99567 741 aaPredicted RBP31.28■■■□□ 2.6
PPP4R1-204ENST00000577393 TOMM22Q9NS69 142 aa31.28■■■□□ 2.6
PPP4R1-204ENST00000577393 FBXO28Q9NVF7 368 aa31.28■■■□□ 2.6
PPP4R1-204ENST00000577393 MYH4Q9Y623 1939 aa31.28■■■□□ 2.6
PPP4R1-204ENST00000577393 UBXN2AP68543 259 aa31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 LRRC47Q8N1G4 583 aaKnown RBP31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 MB21D1Q8N884 522 aa31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 NUDT12Q9BQG2 462 aa31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 NBPF3Q9H094 633 aa31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 IL25Q9H293 177 aa31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 CWC22Q9HCG8 908 aaKnown RBP31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 SYNPO2Q9UMS6 1093 aa31.27■■■□□ 2.6
PPP4R1-204ENST00000577393 RRP12Q5JTH9 1297 aaKnown RBP31.26■■■□□ 2.59
PPP4R1-204ENST00000577393 SOCS4Q8WXH5 440 aa31.26■■■□□ 2.59
PPP4R1-204ENST00000577393 DSCC1Q9BVC3 393 aa31.26■■■□□ 2.59
PPP4R1-204ENST00000577393 IL17RBQ9NRM6 502 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms