RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	POLL	Q9UGP5	575 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	MINDY4B	A8MYZ0	360 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	FANCG	O15287	622 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	MMP10	P09238	476 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	SRGN	P10124	158 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	IL1R1	P14778	569 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	ATP2B1	P20020	1258 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	ACTN2	P35609	894 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	GRIK5	Q16478	980 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	NOM1	Q5C9Z4	860 aa	Known RBP	13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	ATL3	Q6DD88	541 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	TMC4	Q7Z404	712 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	DZIP1	Q86YF9	867 aa	Known RBP	13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	TBC1D16	Q8TBP0	767 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	MRPS27	Q92552	414 aa	Known RBP	13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	CD209	Q9NNX6	404 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	NID2	Q14112	1375 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	CYP2D7	A0A087X1C5	515 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	LDHB	P07195	334 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	FOSB	P53539	338 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	RRP12	Q5JTH9	1297 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	LEKR1	Q6ZMV7	388 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	STK11IP	Q8N1F8	1099 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	FUT8	Q9BYC5	575 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	DEF6	Q9H4E7	631 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	DDX60L	Q5H9U9	1706 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	IFIT3	O14879	490 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	ZSCAN12	O43309	604 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	IVL	P07476	585 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	METAP2	P50579	478 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	GSC	P56915	257 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	SP8	Q8IXZ3	490 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	CXorf56	Q9H5V9	222 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	TOMM22	Q9NS69	142 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	KIAA1468	Q9P260	1216 aa		13.63	□□□□□ -0.23
SPG7-222	ENST00000569820	RXRA	P19793	462 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	CDC27	P30260	824 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	MSL1	Q68DK7	614 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	MICU3	Q86XE3	530 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	MTA3	Q9BTC8	594 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	ATP6V0A2	Q9Y487	856 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	CPLX1	O14810	134 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	ZBTB43	O43298	467 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	FGR	P09769	529 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	NPR1	P16066	1061 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	EVX2	Q03828	476 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	PPP2R3A	Q06190	1150 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	SWT1	Q5T5J6	900 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	FCHSD1	Q86WN1	690 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	ZKSCAN3	Q9BRR0	538 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	PARD6B	Q9BYG5	372 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	ATP8A2	Q9NTI2	1148 aa		13.62	□□□□□ -0.23
SPG7-222	ENST00000569820	USP17L12	C9JPN9	530 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	USP17L21	D6R901	530 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	FANCC	Q00597	558 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	DIXDC1	Q155Q3	683 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	TTC31	Q49AM3	519 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	JAKMIP3	Q5VZ66	844 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	NFXL1	Q6ZNB6	911 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	FAM177A1	Q8N128	213 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	RABGGTA	Q92696	567 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	MYL10	Q9BUA6	226 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	FOCAD	Q5VW36	1801 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820		A0A1B0GVL5	298 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820		H3BQF6	201 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	LMOD1	P29536	600 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	MAP3K9	P80192	1104 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	GUCY1B3	Q02153	619 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	NTRK3	Q16288	839 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	RSRC2	Q7L4I2	434 aa	Known RBP	13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	ESR2	Q92731	530 aa		13.61	□□□□□ -0.23
SPG7-222	ENST00000569820	VWA3A	A6NCI4	1184 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	GOLGA8A	A7E2F4	631 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	C6orf229	H3BNL8	230 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	PC	P11498	1178 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	PDE6B	P35913	854 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	NCAPH	Q15003	741 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	WTAP	Q15007	396 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	SART3	Q15020	963 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	LONRF2	Q1L5Z9	754 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	ILDR1	Q86SU0	546 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	GOLGA1	Q92805	767 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	DRC1	Q96MC2	740 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	PCDHA7	Q9UN72	937 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	MRFAP1	Q9Y605	127 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	SLC12A7	Q9Y666	1083 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	MROH7-TTC4	A0A0A0MT08	1334 aa		13.6	□□□□□ -0.23
SPG7-222	ENST00000569820	CCDC151	A5D8V7	595 aa		13.59	□□□□□ -0.23
SPG7-222	ENST00000569820	BIN1	O00499	593 aa		13.59	□□□□□ -0.23
SPG7-222	ENST00000569820	NDUFA8	P51970	172 aa		13.59	□□□□□ -0.23
SPG7-222	ENST00000569820	NLRP12	P59046	1061 aa		13.59	□□□□□ -0.23
SPG7-222	ENST00000569820	GNG11	P61952	73 aa		13.59	□□□□□ -0.23
SPG7-222	ENST00000569820	GSTO1	P78417	241 aa		13.59	□□□□□ -0.23
SPG7-222	ENST00000569820	MAP2K1	Q02750	393 aa	Predicted RBP	13.59	□□□□□ -0.23
SPG7-222	ENST00000569820	SEC23A	Q15436	765 aa		13.59	□□□□□ -0.23

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