RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ERVK-9P63128 1117 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 ERVK-24P63145 666 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 CCNA1P78396 465 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 MLLT1Q03111 559 aaPredicted RBP23.62■■□□□ 1.37
CMTM3-207ENST00000564060 ALX1Q15699 326 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 CLEC10AQ8IUN9 316 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 SLAIN1Q8ND83 568 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 PAGR1Q9BTK6 254 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 TANGO6Q9C0B7 1094 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 RABGAP1Q9Y3P9 1069 aa23.62■■□□□ 1.37
CMTM3-207ENST00000564060 LAMA4Q16363 1823 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 WDR46O15213 610 aaKnown RBP23.61■■□□□ 1.37
CMTM3-207ENST00000564060 GRK4P32298 578 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 FLT3LGP49771 235 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 IRF5Q13568 498 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 SIAH1Q8IUQ4 282 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 TMEM106CQ9BVX2 250 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 HOXC10Q9NYD6 342 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 PLIN4Q96Q06 1357 aa23.61■■□□□ 1.37
CMTM3-207ENST00000564060 TSPY3P0CV98 308 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 TSPY8P0CW00 308 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 MAPK4P31152 587 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 COG2Q14746 738 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 PPP4R3BQ5MIZ7 849 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 NYAP2Q9P242 653 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 RBPJLQ9UBG7 517 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 ANAPC4Q9UJX5 808 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 PLXNB2O15031 1838 aa23.6■■□□□ 1.37
CMTM3-207ENST00000564060 COL11A1P12107 1806 aaPredicted RBP23.59■■□□□ 1.37
CMTM3-207ENST00000564060 KIAA0100Q14667 2235 aaKnown RBP23.59■■□□□ 1.37
CMTM3-207ENST00000564060 FOXP2O15409 715 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 PRDM1O75626 825 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 HSPD1P10809 573 aaKnown RBP23.59■■□□□ 1.37
CMTM3-207ENST00000564060 PDE4AP27815 886 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 UBXN2AP68543 259 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 TTC22Q5TAA0 569 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 VPS53Q5VIR6 699 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 PXYLP1Q8TE99 480 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 SH3TC2Q8TF17 1288 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.59■■□□□ 1.37
CMTM3-207ENST00000564060 TXNRD2Q9NNW7 524 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 SYNPO2Q9UMS6 1093 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 GABRQQ9UN88 632 aa23.59■■□□□ 1.37
CMTM3-207ENST00000564060 SPDYE16A6NNV3 312 aaPredicted RBP23.58■■□□□ 1.37
CMTM3-207ENST00000564060 ZNF589Q86UQ0 364 aaPredicted RBP23.58■■□□□ 1.37
CMTM3-207ENST00000564060 MB21D1Q8N884 522 aa23.58■■□□□ 1.37
CMTM3-207ENST00000564060 SOCS4Q8WXH5 440 aa23.58■■□□□ 1.37
CMTM3-207ENST00000564060 CWC22Q9HCG8 908 aaKnown RBP23.58■■□□□ 1.37
CMTM3-207ENST00000564060 ADCY3O60266 1144 aa23.57■■□□□ 1.36
CMTM3-207ENST00000564060 FLOT1O75955 427 aa23.57■■□□□ 1.36
CMTM3-207ENST00000564060 FGAP02671 866 aa23.57■■□□□ 1.36
CMTM3-207ENST00000564060 CWC27Q6UX04 472 aaKnown RBP23.57■■□□□ 1.36
CMTM3-207ENST00000564060 SPICE1Q8N0Z3 855 aa23.57■■□□□ 1.36
CMTM3-207ENST00000564060 NEDD1Q8NHV4 660 aa23.57■■□□□ 1.36
CMTM3-207ENST00000564060 BIN2Q9UBW5 565 aaPredicted RBP23.57■■□□□ 1.36
CMTM3-207ENST00000564060 CENPFP49454 3210 aa23.57■■□□□ 1.36
CMTM3-207ENST00000564060 IGKV6D-41A0A0C4DH26 115 aa23.56■■□□□ 1.36
CMTM3-207ENST00000564060 TTLL1O95922 423 aa23.56■■□□□ 1.36
CMTM3-207ENST00000564060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
CMTM3-207ENST00000564060 TSPY2A6NKD2 308 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 RAD21O60216 631 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 PCP11498 1178 aaKnown RBP23.55■■□□□ 1.36
CMTM3-207ENST00000564060 TFAP4Q01664 338 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 CTDSPL2Q05D32 466 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 KIAA1755Q5JYT7 1200 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 CEP95Q96GE4 821 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 NUDT12Q9BQG2 462 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 MTMR4Q9NYA4 1195 aa23.55■■□□□ 1.36
CMTM3-207ENST00000564060 CNMDO75829 334 aa23.54■■□□□ 1.36
CMTM3-207ENST00000564060 DSG3P32926 999 aa23.54■■□□□ 1.36
CMTM3-207ENST00000564060 Q3C1V9 767 aa23.54■■□□□ 1.36
CMTM3-207ENST00000564060 MKL1Q969V6 931 aa23.54■■□□□ 1.36
CMTM3-207ENST00000564060 CLIP2Q9UDT6 1046 aa23.54■■□□□ 1.36
CMTM3-207ENST00000564060 ORC4O43929 436 aa23.53■■□□□ 1.36
CMTM3-207ENST00000564060 GSPT1P15170 499 aaKnown RBP23.53■■□□□ 1.36
CMTM3-207ENST00000564060 CENPQQ7L2Z9 268 aaPredicted RBP23.53■■□□□ 1.36
CMTM3-207ENST00000564060 GPR142Q7Z601 462 aa23.53■■□□□ 1.36
CMTM3-207ENST00000564060 PLEKHH3Q7Z736 793 aa23.53■■□□□ 1.36
CMTM3-207ENST00000564060 PORCNQ9H237 461 aa23.53■■□□□ 1.36
CMTM3-207ENST00000564060 GJD2Q9UKL4 321 aa23.53■■□□□ 1.36
CMTM3-207ENST00000564060 IVNS1ABPQ9Y6Y0 642 aa23.53■■□□□ 1.36
CMTM3-207ENST00000564060 RAD50Q92878 1312 aa23.53■■□□□ 1.36
CMTM3-207ENST00000564060 ZNF236Q9UL36 1845 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 POTEFA5A3E0 1075 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 F5H6K3 240 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 PEX10O60683 326 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 FGRP09769 529 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 KLRC3Q07444 240 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 FAM47AQ5JRC9 791 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 POTEEQ6S8J3 1075 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 RUFY2Q8WXA3 655 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
CMTM3-207ENST00000564060 TOMM22Q9NS69 142 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 BTBD7Q9P203 1132 aa23.52■■□□□ 1.36
CMTM3-207ENST00000564060 RANBP6O60518 1105 aaKnown RBP23.51■■□□□ 1.35
CMTM3-207ENST00000564060 NT5C2P49902 561 aa23.51■■□□□ 1.35
CMTM3-207ENST00000564060 FAM83BQ5T0W9 1011 aa23.51■■□□□ 1.35
CMTM3-207ENST00000564060 WDR78Q5VTH9 848 aa23.51■■□□□ 1.35
CMTM3-207ENST00000564060 TRMT44Q8IYL2 757 aaKnown RBP23.51■■□□□ 1.35
CMTM3-207ENST00000564060 GMCL1P1Q8NEA9 526 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms