RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CALM3P0DP25 149 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 MAP3K14Q99558 947 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 SH2D4AQ9H788 454 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 AS3MTQ9HBK9 375 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 GOLGA8BA8MQT2 603 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 UBE2Q2LH0YL09 131 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 ATP2B2Q01814 1243 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 FSTL1Q12841 308 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 CUL4AQ13619 759 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 CCDC84Q86UT8 332 aaPredicted RBP15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 LRRC47Q8N1G4 583 aaKnown RBP15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 GMCL1P1Q8NEA9 526 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 ACER1Q8TDN7 264 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 CLMNQ96JQ2 1002 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 MYL10Q9BUA6 226 aa15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 SLKQ9H2G2 1235 aaPredicted RBP15.95■□□□□ 0.14
HMBOX1-213ENST00000560269 SNHG28P0DPA3 235 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 ECE1P42892 770 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 METAP2P50579 478 aaKnown RBP eCLIP15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 ST3GAL1Q11201 340 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 PPP2R5BQ15173 497 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 MICU3Q86XE3 530 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 ERO1BQ86YB8 467 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 FANCBQ8NB91 859 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 KIAA1683Q9H0B3 1180 aa15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 NAP1L2Q9ULW6 460 aaPredicted RBP15.94■□□□□ 0.14
HMBOX1-213ENST00000560269 SPDYE5A6NIY4 337 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 GOLGA8AA7E2F4 631 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 PDHBP11177 359 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 PPATQ06203 517 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 SCRN1Q12765 414 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 STK3Q13188 491 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 GRM4Q14833 912 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 RAB11FIP4Q86YS3 637 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 NECAB1Q8N987 351 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 ZNF280CQ8ND82 737 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 NUP133Q8WUM0 1156 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 ELP3Q9H9T3 547 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 AFG3L2Q9Y4W6 797 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 ZHX2Q9Y6X8 837 aa15.93■□□□□ 0.14
HMBOX1-213ENST00000560269 USP17L10C9JJH3 530 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 F5H6K3 240 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 RXRAP19793 462 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 KLRC3Q07444 240 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 SPP2Q13103 211 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 RTN1Q16799 776 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 CCDC83Q8IWF9 413 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 DCAF4Q8WV16 495 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 CHMP4CQ96CF2 233 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 GMCL1Q96IK5 515 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 VCPKMTQ9H867 229 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 GOPCQ9HD26 462 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 FAM217BQ9NTX9 383 aaPredicted RBP15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 PTPRFP10586 1907 aa15.92■□□□□ 0.14
HMBOX1-213ENST00000560269 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 PALM3A6NDB9 673 aaPredicted RBP15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 C19orf81C9J6K1 198 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 NDUFB10O96000 172 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 CDC27P30260 824 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 KIF5BP33176 963 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 USP14P54578 494 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 BACE1P56817 501 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 CCT2P78371 535 aaKnown RBP15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 PPIL2Q13356 520 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 SLFN13Q68D06 897 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 RASGRP2Q7LDG7 609 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 CCDC144CPQ8IYA2 1237 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 CTCFLQ8NI51 663 aaPredicted RBP15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 SLC10A4Q96EP9 437 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 FEZ1Q99689 392 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 NCOA5Q9HCD5 579 aaKnown RBP15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 RBM28Q9NW13 759 aaKnown RBP15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 MAD2L2Q9UI95 211 aa15.91■□□□□ 0.14
HMBOX1-213ENST00000560269 DHX16O60231 1041 aaKnown RBP15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 PARP1P09874 1014 aaKnown RBP15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 ZNF543Q08ER8 600 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 MTMR2Q13614 643 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 SH3D19Q5HYK7 790 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 KIAA1755Q5JYT7 1200 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 USP17L2Q6R6M4 530 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 LPAR1Q92633 364 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 OTUD5Q96G74 571 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 INTS4Q96HW7 963 aaKnown RBP15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 IPO9Q96P70 1041 aaKnown RBP15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 LLPHQ9BRT6 129 aaKnown RBP15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 KCNH4Q9UQ05 1017 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 LOC285556D6RIA3 1793 aa15.9■□□□□ 0.14
HMBOX1-213ENST00000560269 TRIM75PA6NK02 468 aa15.89■□□□□ 0.13
HMBOX1-213ENST00000560269 CXCL11O14625 94 aa15.89■□□□□ 0.13
HMBOX1-213ENST00000560269 CTDNEP1O95476 244 aa15.89■□□□□ 0.13
HMBOX1-213ENST00000560269 ADD1P35611 737 aaKnown RBP15.89■□□□□ 0.13
HMBOX1-213ENST00000560269 GNAQP50148 359 aa15.89■□□□□ 0.13
HMBOX1-213ENST00000560269 HUNKP57058 714 aa15.89■□□□□ 0.13
HMBOX1-213ENST00000560269 ZYXQ15942 572 aaKnown RBP15.89■□□□□ 0.13
HMBOX1-213ENST00000560269 NTRK3Q16288 839 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms