RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 USP17L17D6RBQ6 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L19D6RCP7 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L20D6RJB6 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 ORC4O43929 436 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 NMT2O60551 498 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 HOXA7P31268 230 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 LACTBP83111 547 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 CAP1Q01518 475 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L24Q0WX57 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 AKNAD1Q5T1N1 836 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 SAMD1Q6SPF0 538 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 NEDD1Q8NHV4 660 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 P2RX7Q99572 595 aaKnown RBP18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 VCPKMTQ9H867 229 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 GOPCQ9HD26 462 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 BCRP11274 1271 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 HERVK_113P62684 666 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 KIAA1211Q6ZU35 1233 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 LRRC47Q8N1G4 583 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 STAG1Q8WVM7 1258 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 ESYT1Q9BSJ8 1104 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 PAGR1Q9BTK6 254 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 RNF41Q9H4P4 317 aaPredicted RBP18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 MTMR4Q9NYA4 1195 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 NYAP2Q9P242 653 aa18.76■□□□□ 0.59
RABGGTA-206ENST00000558649 PEX10O60683 326 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 CDC45O75419 566 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 TTLL1O95922 423 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 GCLCP48506 637 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 CATSPERGQ6ZRH7 1159 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 LPAR1Q92633 364 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 CHMP4CQ96CF2 233 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 EFCC1Q9HA90 598 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
RABGGTA-206ENST00000558649 PARP14Q460N5 1801 aa18.74■□□□□ 0.59
RABGGTA-206ENST00000558649 FGRP09769 529 aa18.74■□□□□ 0.59
RABGGTA-206ENST00000558649 IL17RBQ9NRM6 502 aa18.74■□□□□ 0.59
RABGGTA-206ENST00000558649 ISY1Q9ULR0 285 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-206ENST00000558649 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
RABGGTA-206ENST00000558649 WDR46O15213 610 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 FMNL1O95466 1100 aaPredicted RBP18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 CTGFP29279 349 aa18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 PSMC4P43686 418 aa18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 FAM110CQ1W6H9 321 aa18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 FAM83BQ5T0W9 1011 aa18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 NUP88Q99567 741 aaPredicted RBP18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 MTMR7Q9Y216 660 aa18.73■□□□□ 0.59
RABGGTA-206ENST00000558649 B4E1Z4 1266 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 F5H6K3 240 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 KDM4AO75164 1064 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 FLOT1O75955 427 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 PCP11498 1178 aaKnown RBP18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 KLRC3Q07444 240 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 ARHGEF6Q15052 776 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 ESR2Q92731 530 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 TRIM47Q96LD4 638 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 ZKSCAN3Q9BRR0 538 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 RBM8AQ9Y5S9 174 aaKnown RBP18.72■□□□□ 0.59
RABGGTA-206ENST00000558649 A0A0G2JMZ2 1700 aa18.71■□□□□ 0.59
RABGGTA-206ENST00000558649 RLFQ13129 1914 aa18.71■□□□□ 0.59
RABGGTA-206ENST00000558649 SPDYE16A6NNV3 312 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-206ENST00000558649 NDUFB10O96000 172 aa18.71■□□□□ 0.59
RABGGTA-206ENST00000558649 FCGRTP55899 365 aa18.71■□□□□ 0.59
RABGGTA-206ENST00000558649 PPP4R3BQ5MIZ7 849 aa18.71■□□□□ 0.59
RABGGTA-206ENST00000558649 LSG1Q9H089 658 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-206ENST00000558649 COL11A1P12107 1806 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 CYP21A2P08686 494 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 COG2Q14746 738 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 PKN2Q16513 984 aaKnown RBP18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 GPRC5AQ8NFJ5 357 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 GTF3C2Q8WUA4 911 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 MAP4K1Q92918 833 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 MKL1Q969V6 931 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 ABHD8Q96I13 439 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 FBXO28Q9NVF7 368 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 RBPJLQ9UBG7 517 aa18.7■□□□□ 0.58
RABGGTA-206ENST00000558649 TNPO2O14787 897 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 CAPN15O75808 1086 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 ERVK-9P63128 1117 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 ERVK-24P63145 666 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 SLFN13Q68D06 897 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 FBXO46Q6PJ61 603 aaPredicted RBP18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 POTEEQ6S8J3 1075 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 RASGRP2Q7LDG7 609 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 GMCL1P1Q8NEA9 526 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 ATG4CQ96DT6 458 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 KRT23Q9C075 422 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 CNNM2Q9H8M5 875 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 MORF4L1Q9UBU8 362 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 PTPN22Q9Y2R2 807 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 TAF6LQ9Y6J9 622 aa18.69■□□□□ 0.58
RABGGTA-206ENST00000558649 CNMDO75829 334 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 TRDNQ13061 729 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 CWC22Q9HCG8 908 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms