RNA–Protein interactions for RNA: ENST00000557135.5

WARS-238, Transcript of tryptophanyl-tRNA synthetase, human

APPRIS P1 TSL 1 (best) BASIC

Gene WARS, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WARS-238	ENST00000557135	SF3A1	Q15459	793 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	CCAR1	Q8IX12	1150 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	LRRC47	Q8N1G4	583 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	PHF20	Q9BVI0	1012 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	EHD4	Q9H223	541 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	CPVL	Q9H3G5	476 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	MTMR4	Q9NYA4	1195 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	BCS1L	Q9Y276	419 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	SIPA1L1	O43166	1804 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	MYO3B	Q8WXR4	1341 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	BRCA1	P38398	1863 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	CLRN2	A0PK11	232 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	PALM3	A6NDB9	673 aa	Predicted RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	MPHOSPH10	O00566	681 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	SPTLC2	O15270	562 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	CYTH3	O43739	400 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	SCG2	P13521	617 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	CXCL9	Q07325	125 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	CAMK4	Q16566	473 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	USP17L2	Q6R6M4	530 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	VPS33B	Q9H267	617 aa		11.45	□□□□□ -0.58
WARS-238	ENST00000557135	DHX36	Q9H2U1	1008 aa	Known RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	FOXP1	Q9H334	677 aa	Predicted RBP	11.45	□□□□□ -0.58
WARS-238	ENST00000557135	FAM205C	A6NFA0	338 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	SPDYE2B	A6NHP3	402 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	USP17L5	A8MUK1	530 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	SPDYE6	P0CI01	402 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	XBP1	P17861	261 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	MARCKS	P29966	332 aa	Predicted RBP	11.44	□□□□□ -0.58
WARS-238	ENST00000557135	TOB1	P50616	345 aa	Predicted RBP	11.44	□□□□□ -0.58
WARS-238	ENST00000557135	PFKFB3	Q16875	520 aa	Predicted RBP	11.44	□□□□□ -0.58
WARS-238	ENST00000557135	FSIP1	Q8NA03	581 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	KCNG4	Q8TDN1	519 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.44	□□□□□ -0.58	2e-14	■■□□□ 12.1
WARS-238	ENST00000557135	NUP62CL	Q9H1M0	184 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	TSPY26P	Q9H489	355 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	PI4KB	Q9UBF8	816 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	CD2AP	Q9Y5K6	639 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	MYH8	P13535	1937 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	TCP10L2	B9ZVM9	353 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	KLRF2	D3W0D1	207 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	ADAMTS3	O15072	1205 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	NPM3	O75607	178 aa	Known RBP	11.44	□□□□□ -0.58
WARS-238	ENST00000557135	KRT2	P35908	639 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	GNAQ	P50148	359 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	SLC39A14	Q15043	492 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	PTPA	Q15257	358 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	DLGAP5	Q15398	846 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	NPY5R	Q15761	445 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	NOM1	Q5C9Z4	860 aa	Known RBP	11.44	□□□□□ -0.58
WARS-238	ENST00000557135	EARS2	Q5JPH6	523 aa	Known RBP	11.44	□□□□□ -0.58
WARS-238	ENST00000557135	NLGN2	Q8NFZ4	835 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	CLIP2	Q9UDT6	1046 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	HDAC9	Q9UKV0	1011 aa		11.44	□□□□□ -0.58
WARS-238	ENST00000557135	FER1L6	Q2WGJ9	1857 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.43	□□□□□ -0.58
WARS-238	ENST00000557135	SHTN1	A0MZ66	631 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	ENTPD3	O75355	529 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	PARP1	P09874	1014 aa	Known RBP	11.43	□□□□□ -0.58
WARS-238	ENST00000557135	ATP2B2	Q01814	1243 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	RASSF7	Q02833	373 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	OGFOD1	Q8N543	542 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	RNF214	Q8ND24	703 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	CLSTN2	Q9H4D0	955 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	CABP5	Q9NP86	173 aa		11.43	□□□□□ -0.58
WARS-238	ENST00000557135	DDX19A	Q9NUU7	478 aa	Known RBP	11.43	□□□□□ -0.58
WARS-238	ENST00000557135	ZNF70	Q9UC06	446 aa	Predicted RBP	11.43	□□□□□ -0.58
WARS-238	ENST00000557135	LETM1	O95202	739 aa	Predicted RBP	11.42	□□□□□ -0.58
WARS-238	ENST00000557135	TTLL1	O95922	423 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	ATP2B1	P20020	1258 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.42	□□□□□ -0.58
WARS-238	ENST00000557135	ADAL	Q6DHV7	355 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	CIAPIN1	Q6FI81	312 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	TYW1B	Q6NUM6	668 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	TRIM34	Q9BYJ4	488 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	UBA5	Q9GZZ9	404 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135		A0A1B0GVL5	298 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	GDF11	O95390	407 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	PDHB	P11177	359 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	PRELP	P51888	382 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	NLRP5	P59047	1200 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	SNW1	Q13573	536 aa	Known RBP	11.42	□□□□□ -0.58
WARS-238	ENST00000557135	CERKL	Q49MI3	558 aa	Predicted RBP	11.42	□□□□□ -0.58
WARS-238	ENST00000557135	WWC2	Q6AWC2	1192 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	CCDC73	Q6ZRK6	1079 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	CKAP2L	Q8IYA6	745 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	AGBL3	Q8NEM8	1001 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	ENGASE	Q8NFI3	743 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	JDP2	Q8WYK2	163 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	MRPS27	Q92552	414 aa	Known RBP	11.42	□□□□□ -0.58
WARS-238	ENST00000557135	TNFRSF25	Q93038	417 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	LZTS2	Q9BRK4	669 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	FUCA2	Q9BTY2	467 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	TNMD	Q9H2S6	317 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	TMOD2	Q9NZR1	351 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	PCDHB6	Q9Y5E3	794 aa		11.42	□□□□□ -0.58
WARS-238	ENST00000557135	ATRNL1	Q5VV63	1379 aa		11.41	□□□□□ -0.58
WARS-238	ENST00000557135	GREB1L	Q9C091	1923 aa	Predicted RBP	11.41	□□□□□ -0.58
WARS-238	ENST00000557135		A0A1W2PQ27	194 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms