RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
ACTN1-219ENST00000556432 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 MPHOSPH10O00566 681 aaKnown RBP16.99■□□□□ 0.31
ACTN1-219ENST00000556432 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
ACTN1-219ENST00000556432 COBLO75128 1261 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 CLTBP09497 229 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-219ENST00000556432 GRIN2CQ14957 1233 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 TNNI3KQ59H18 835 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 USP38Q8NB14 1042 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 EHD4Q9H223 541 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 HOXC10Q9NYD6 342 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 FPGT-TNNI3KV9GXZ4 949 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 MYH1P12882 1939 aa16.99■□□□□ 0.31
ACTN1-219ENST00000556432 IGHA2P01877 340 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 RARBP10826 455 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 DNAJB2P25686 324 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 ITGB8P26012 769 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 EPHB4P54760 987 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 FPGSQ05932 587 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 COG2Q14746 738 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 CERS3Q8IU89 383 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 PPM1EQ8WY54 764 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 XPNPEP3Q9NQH7 507 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 ZNF236Q9UL36 1845 aa16.98■□□□□ 0.31
ACTN1-219ENST00000556432 POLR3DP05423 398 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-219ENST00000556432 SEPT2Q15019 361 aa16.97■□□□□ 0.31
ACTN1-219ENST00000556432 C1orf53Q5VUE5 145 aa16.97■□□□□ 0.31
ACTN1-219ENST00000556432 RNF180Q86T96 592 aa16.97■□□□□ 0.31
ACTN1-219ENST00000556432 MAGEB6Q8N7X4 407 aa16.97■□□□□ 0.31
ACTN1-219ENST00000556432 SHCBP1Q8NEM2 672 aa16.97■□□□□ 0.31
ACTN1-219ENST00000556432 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
ACTN1-219ENST00000556432 PHF24Q9UPV7 400 aa16.97■□□□□ 0.31
ACTN1-219ENST00000556432 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-219ENST00000556432 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-219ENST00000556432 PGK1P00558 417 aa16.96■□□□□ 0.31
ACTN1-219ENST00000556432 SHMT1P34896 483 aa16.96■□□□□ 0.31
ACTN1-219ENST00000556432 MB21D1Q8N884 522 aa16.96■□□□□ 0.31
ACTN1-219ENST00000556432 MROH8Q9H579 483 aa16.96■□□□□ 0.31
ACTN1-219ENST00000556432 ZNF576Q9H609 170 aa16.96■□□□□ 0.31
ACTN1-219ENST00000556432 GPR108Q9NPR9 543 aa16.96■□□□□ 0.31
ACTN1-219ENST00000556432 MYO5AQ9Y4I1 1855 aaKnown RBP16.96■□□□□ 0.31
ACTN1-219ENST00000556432 IGSF3O75054 1194 aa16.95■□□□□ 0.3
ACTN1-219ENST00000556432 FLOT1O75955 427 aa16.95■□□□□ 0.3
ACTN1-219ENST00000556432 FCER1AP12319 257 aa16.95■□□□□ 0.3
ACTN1-219ENST00000556432 ARHGAP45Q92619 1136 aa16.95■□□□□ 0.3
ACTN1-219ENST00000556432 TIFAQ96CG3 184 aa16.95■□□□□ 0.3
ACTN1-219ENST00000556432 MAML3Q96JK9 1138 aa16.95■□□□□ 0.3
ACTN1-219ENST00000556432 GAS2L1Q99501 681 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-219ENST00000556432 RAPGEFL1Q9UHV5 662 aa16.95■□□□□ 0.3
ACTN1-219ENST00000556432 A0A1W2PQ45 241 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-219ENST00000556432 A0A1W2PQY0 241 aa16.94■□□□□ 0.3
ACTN1-219ENST00000556432 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
ACTN1-219ENST00000556432 GUCY1A2P33402 732 aa16.94■□□□□ 0.3
ACTN1-219ENST00000556432 PLCD1P51178 756 aa16.94■□□□□ 0.3
ACTN1-219ENST00000556432 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
ACTN1-219ENST00000556432 CCDC129Q6ZRS4 1044 aa16.94■□□□□ 0.3
ACTN1-219ENST00000556432 ABRAQ8N0Z2 381 aa16.94■□□□□ 0.3
ACTN1-219ENST00000556432 IL27Q8NEV9 243 aa16.94■□□□□ 0.3
ACTN1-219ENST00000556432 DCDC2CA8MYV0 355 aa16.93■□□□□ 0.3
ACTN1-219ENST00000556432 MAP3K12Q12852 859 aa16.93■□□□□ 0.3
ACTN1-219ENST00000556432 SPICE1Q8N0Z3 855 aa16.93■□□□□ 0.3
ACTN1-219ENST00000556432 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
ACTN1-219ENST00000556432 ZNF512BQ96KM6 892 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-219ENST00000556432 A0A1W2PRG0 241 aa16.92■□□□□ 0.3
ACTN1-219ENST00000556432 IPO8O15397 1037 aaKnown RBP16.92■□□□□ 0.3
ACTN1-219ENST00000556432 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
ACTN1-219ENST00000556432 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
ACTN1-219ENST00000556432 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-219ENST00000556432 CLUAP1Q96AJ1 413 aa16.92■□□□□ 0.3
ACTN1-219ENST00000556432 LENG1Q96BZ8 264 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-219ENST00000556432 MMP19Q99542 508 aa16.92■□□□□ 0.3
ACTN1-219ENST00000556432 CCDC8Q9H0W5 538 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-219ENST00000556432 TLR7Q9NYK1 1049 aaKnown RBP16.92■□□□□ 0.3
ACTN1-219ENST00000556432 THEGQ9P2T0 379 aa16.92■□□□□ 0.3
ACTN1-219ENST00000556432 NRBP1Q9UHY1 535 aa16.92■□□□□ 0.3
ACTN1-219ENST00000556432 DBNLQ9UJU6 430 aaKnown RBP16.92■□□□□ 0.3
ACTN1-219ENST00000556432 MUC3AQ02505 3323 aa16.92■□□□□ 0.3
ACTN1-219ENST00000556432 PGK2P07205 417 aa16.91■□□□□ 0.3
ACTN1-219ENST00000556432 DSG3P32926 999 aa16.91■□□□□ 0.3
ACTN1-219ENST00000556432 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
ACTN1-219ENST00000556432 PRDM12Q9H4Q4 367 aa16.91■□□□□ 0.3
ACTN1-219ENST00000556432 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
ACTN1-219ENST00000556432 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
ACTN1-219ENST00000556432 A0A0G2JMZ2 1700 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 MAGEB6P1A0A0J9YX57 407 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 SLC25A27O95847 323 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 TRIM27P14373 513 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 AKR1A1P14550 325 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-219ENST00000556432 FAAP100Q0VG06 881 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 KCTD2Q14681 263 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 KIAA1755Q5JYT7 1200 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 CCDC174Q6PII3 467 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 ADAMTS19Q8TE59 1207 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 NUP133Q8WUM0 1156 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 ATXN2LQ8WWM7 1075 aaKnown RBP16.9■□□□□ 0.3
ACTN1-219ENST00000556432 TINF2Q9BSI4 451 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms