RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 GRM4Q14833 912 aa10.99□□□□□ -0.65
HNRNPC-223ENST00000556142 MYSM1Q5VVJ2 828 aa10.99□□□□□ -0.65
HNRNPC-223ENST00000556142 SH3BP5LQ7L8J4 393 aa10.99□□□□□ -0.65
HNRNPC-223ENST00000556142 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
HNRNPC-223ENST00000556142 PRMT6Q96LA8 375 aaPredicted RBP10.99□□□□□ -0.65
HNRNPC-223ENST00000556142 EHD4Q9H223 541 aa10.99□□□□□ -0.65
HNRNPC-223ENST00000556142 SWAP70Q9UH65 585 aa10.99□□□□□ -0.65
HNRNPC-223ENST00000556142 MYO3BQ8WXR4 1341 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 PSME4Q14997 1843 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 GOLGA6L3A6NEY3 463 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 PSMD14O00487 310 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 MMP1P03956 469 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 SHMT1P34896 483 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 NASPP49321 788 aaPredicted RBP10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 SLC35G1Q2M3R5 365 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 CFAP100Q494V2 611 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 METTL16Q86W50 562 aaKnown RBP10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 TRIM22Q8IYM9 498 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 LARGE2Q8N3Y3 721 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 KAT14Q9H8E8 782 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 WBP1LQ9NX94 342 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 MYH1P12882 1939 aa10.98□□□□□ -0.65
HNRNPC-223ENST00000556142 PALM3A6NDB9 673 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 DDTLA6NHG4 134 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 AKR1B1P15121 316 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 LIG1P18858 919 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 STAG2Q8N3U4 1231 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 CTCFLQ8NI51 663 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 DNAJC18Q9H819 358 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 POLR3EQ9NVU0 708 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 ZNRF3Q9ULT6 936 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 CLIC4Q9Y696 253 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 V9GY48 417 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 PASKQ96RG2 1323 aa10.97□□□□□ -0.65
HNRNPC-223ENST00000556142 MYH15Q9Y2K3 1946 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 IQCA1LA6NCM1 817 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 TMEM88BA6NKF7 163 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 RAD17O75943 681 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 DDNO94850 711 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 YEATS4O95619 227 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 SLURP2P0DP57 97 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 XRCC6P12956 609 aaKnown RBP eCLIP10.96□□□□□ -0.653e-6■□□□□ 10.7
HNRNPC-223ENST00000556142 CACNB3P54284 484 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 MLLT1Q03111 559 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 NPY5RQ15761 445 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 CCDC183Q5T5S1 534 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 LRSAM1Q6UWE0 723 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 LDHDQ86WU2 507 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 MTMR14Q8NCE2 650 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 CEP95Q96GE4 821 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 ZBED3Q96IU2 234 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 PHF20Q9BVI0 1012 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 DHX36Q9H2U1 1008 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 FOXP1Q9H334 677 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 TDRD3Q9H7E2 651 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 KCNJ14Q9UNX9 436 aa10.96□□□□□ -0.65
HNRNPC-223ENST00000556142 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 SYCE3A1L190 88 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 BTBD18B2RXH4 712 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 CYTH3O43739 400 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 ENTPD3O75355 529 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 HLA-DOAP06340 250 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 TOP1P11387 765 aaKnown RBP10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 KIF5BP33176 963 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 RBM5P52756 815 aaKnown RBP eCLIP10.95□□□□□ -0.665e-14■■□□□ 12.8
HNRNPC-223ENST00000556142 CEBPZQ03701 1054 aaKnown RBP10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 CXCL9Q07325 125 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 TRIM29Q14134 588 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 PTPAQ15257 358 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 L1TD1Q5T7N2 865 aaKnown RBP10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 ANO1Q5XXA6 986 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 TATDN1Q6P1N9 297 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 GRPEL1Q9HAV7 217 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 MTMR4Q9NYA4 1195 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 ATRNL1Q5VV63 1379 aa10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
HNRNPC-223ENST00000556142 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 SNHG28P0DPA3 235 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 HSPA8P11142 646 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 MRE11P49959 708 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 GNAQP50148 359 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 TOB1P50616 345 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 PFKFB3Q16875 520 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 FOXP4Q8IVH2 680 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 NIM1KQ8IY84 436 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 DIS3L2Q8IYB7 885 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 OXER1Q8TDS5 423 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 TNFRSF25Q93038 417 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 FUCA2Q9BTY2 467 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 TAOK3Q9H2K8 898 aa10.94□□□□□ -0.66
HNRNPC-223ENST00000556142 VPS54Q9P1Q0 977 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms