RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 CTCFP49711 727 aaPredicted RBP22.01■■□□□ 1.11
DDX54-209ENST00000551912 RALYLQ86SE5 291 aaKnown RBP22.01■■□□□ 1.11
DDX54-209ENST00000551912 IQCA1Q86XH1 822 aa22.01■■□□□ 1.11
DDX54-209ENST00000551912 NCOA7Q8NI08 942 aa22.01■■□□□ 1.11
DDX54-209ENST00000551912 ZSWIM5Q9P217 1185 aa22.01■■□□□ 1.11
DDX54-209ENST00000551912 PNMA3Q9UL41 463 aa22.01■■□□□ 1.11
DDX54-209ENST00000551912 SYNPO2Q9UMS6 1093 aa22.01■■□□□ 1.11
DDX54-209ENST00000551912 EPB41L2O43491 1005 aaKnown RBP22■■□□□ 1.11
DDX54-209ENST00000551912 OSBPP22059 807 aa22■■□□□ 1.11
DDX54-209ENST00000551912 HOXA7P31268 230 aaPredicted RBP22■■□□□ 1.11
DDX54-209ENST00000551912 STOX1Q6ZVD7 989 aa22■■□□□ 1.11
DDX54-209ENST00000551912 RAD21O60216 631 aa21.99■■□□□ 1.11
DDX54-209ENST00000551912 EIF5BO60841 1220 aaKnown RBP21.99■■□□□ 1.11
DDX54-209ENST00000551912 HSPA8P11142 646 aaKnown RBP21.99■■□□□ 1.11
DDX54-209ENST00000551912 NOVP48745 357 aa21.99■■□□□ 1.11
DDX54-209ENST00000551912 CCDC178Q5BJE1 867 aa21.99■■□□□ 1.11
DDX54-209ENST00000551912 KIAA1755Q5JYT7 1200 aa21.99■■□□□ 1.11
DDX54-209ENST00000551912 SPICE1Q8N0Z3 855 aa21.99■■□□□ 1.11
DDX54-209ENST00000551912 LRRC47Q8N1G4 583 aaKnown RBP21.99■■□□□ 1.11
DDX54-209ENST00000551912 R3HDMLQ9H3Y0 253 aa21.99■■□□□ 1.11
DDX54-209ENST00000551912 MYH4Q9Y623 1939 aa21.99■■□□□ 1.11
DDX54-209ENST00000551912 USP17L15C9J2P7 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L13C9JLJ4 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L11C9JVI0 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L18D6R9N7 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L22D6RA61 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L17D6RBQ6 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L19D6RCP7 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L20D6RJB6 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 CYP2C8P10632 490 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 ZKSCAN1P17029 563 aaPredicted RBP21.98■■□□□ 1.11
DDX54-209ENST00000551912 IRX3P78415 501 aaPredicted RBP21.98■■□□□ 1.11
DDX54-209ENST00000551912 USP17L24Q0WX57 530 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 TTC14Q96N46 770 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 ZKSCAN3Q9BRR0 538 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 UBAC1Q9BSL1 405 aa21.98■■□□□ 1.11
DDX54-209ENST00000551912 ASCC2Q9H1I8 757 aaPredicted RBP21.98■■□□□ 1.11
DDX54-209ENST00000551912 RPAP3Q9H6T3 665 aaPredicted RBP21.98■■□□□ 1.11
DDX54-209ENST00000551912 F5H6K3 240 aa21.97■■□□□ 1.11
DDX54-209ENST00000551912 WDR46O15213 610 aaKnown RBP21.97■■□□□ 1.11
DDX54-209ENST00000551912 TLR2O60603 784 aa21.97■■□□□ 1.11
DDX54-209ENST00000551912 HSPA4P34932 840 aa21.97■■□□□ 1.11
DDX54-209ENST00000551912 KLRC3Q07444 240 aa21.97■■□□□ 1.11
DDX54-209ENST00000551912 SMCR8Q8TEV9 937 aaPredicted RBP21.97■■□□□ 1.11
DDX54-209ENST00000551912 ZSCAN10Q96SZ4 725 aaPredicted RBP21.97■■□□□ 1.11
DDX54-209ENST00000551912 NDUFB10O96000 172 aa21.96■■□□□ 1.11
DDX54-209ENST00000551912 TOP1P11387 765 aaKnown RBP21.96■■□□□ 1.11
DDX54-209ENST00000551912 TSGA10IPQ3SY00 556 aa21.96■■□□□ 1.11
DDX54-209ENST00000551912 NOM1Q5C9Z4 860 aaKnown RBP21.96■■□□□ 1.11
DDX54-209ENST00000551912 CATSPERGQ6ZRH7 1159 aa21.96■■□□□ 1.11
DDX54-209ENST00000551912 CYB5R4Q7L1T6 521 aa21.96■■□□□ 1.11
DDX54-209ENST00000551912 DGKHQ86XP1 1220 aa21.96■■□□□ 1.11
DDX54-209ENST00000551912 GMCL1P1Q8NEA9 526 aa21.96■■□□□ 1.11
DDX54-209ENST00000551912 USP26Q9BXU7 913 aa21.96■■□□□ 1.11
DDX54-209ENST00000551912 GPR25O00155 361 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 LBX1P52954 281 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 KRT32Q14532 448 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 RCSD1Q6JBY9 416 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 MB21D2Q8IYB1 491 aaPredicted RBP21.95■■□□□ 1.1
DDX54-209ENST00000551912 RASEFQ8IZ41 740 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 TMEM47Q9BQJ4 181 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 TANGO6Q9C0B7 1094 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 TNKSO95271 1327 aa21.95■■□□□ 1.1
DDX54-209ENST00000551912 SLFN13Q68D06 897 aa21.94■■□□□ 1.1
DDX54-209ENST00000551912 ENAHQ8N8S7 591 aaPredicted RBP21.94■■□□□ 1.1
DDX54-209ENST00000551912 KCNB2Q92953 911 aa21.94■■□□□ 1.1
DDX54-209ENST00000551912 P2RX7Q99572 595 aaKnown RBP21.94■■□□□ 1.1
DDX54-209ENST00000551912 ADGRA2Q96PE1 1338 aa21.94■■□□□ 1.1
DDX54-209ENST00000551912 MCCP23508 829 aa21.93■■□□□ 1.1
DDX54-209ENST00000551912 GCLCP48506 637 aaPredicted RBP21.93■■□□□ 1.1
DDX54-209ENST00000551912 HERVK_113P62684 666 aa21.93■■□□□ 1.1
DDX54-209ENST00000551912 SART3Q15020 963 aaKnown RBP21.93■■□□□ 1.1
DDX54-209ENST00000551912 FAM83BQ5T0W9 1011 aa21.93■■□□□ 1.1
DDX54-209ENST00000551912 C17orf99Q6UX52 265 aa21.93■■□□□ 1.1
DDX54-209ENST00000551912 ANKS1AQ92625 1134 aa21.93■■□□□ 1.1
DDX54-209ENST00000551912 CPA4Q9UI42 421 aa21.93■■□□□ 1.1
DDX54-209ENST00000551912 ERICH2A1L162 156 aa21.92■■□□□ 1.1
DDX54-209ENST00000551912 IFIT3O14879 490 aaKnown RBP21.92■■□□□ 1.1
DDX54-209ENST00000551912 MCM5P33992 734 aa21.92■■□□□ 1.1
DDX54-209ENST00000551912 C8orf34Q49A92 452 aa21.92■■□□□ 1.1
DDX54-209ENST00000551912 CHST3Q7LGC8 479 aa21.92■■□□□ 1.1
DDX54-209ENST00000551912 GTF3C2Q8WUA4 911 aaPredicted RBP21.92■■□□□ 1.1
DDX54-209ENST00000551912 GMCL1Q96IK5 515 aa21.92■■□□□ 1.1
DDX54-209ENST00000551912 NEK1Q96PY6 1258 aa21.92■■□□□ 1.1
DDX54-209ENST00000551912 NUP88Q99567 741 aaPredicted RBP21.92■■□□□ 1.1
DDX54-209ENST00000551912 FKTNO75072 461 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 FLOT1O75955 427 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 SLC1A4P43007 532 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 ANTXR2P58335 489 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 COG2Q14746 738 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 SEC23AQ15436 765 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 IFIT1BQ5T764 474 aaKnown RBP21.91■■□□□ 1.1
DDX54-209ENST00000551912 ZNF296Q8WUU4 475 aaPredicted RBP21.91■■□□□ 1.1
DDX54-209ENST00000551912 KAT14Q9H8E8 782 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 HOXC10Q9NYD6 342 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 MTMR7Q9Y216 660 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 SNX14Q9Y5W7 946 aa21.91■■□□□ 1.1
DDX54-209ENST00000551912 PRC1O43663 620 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 BCRP11274 1271 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 BMP3P12645 472 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms