RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 TNNI2P48788 182 aa7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 ATG4DQ86TL0 474 aaPredicted RBP7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 SLITRK4Q8IW52 837 aa7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 FAM177A1Q8N128 213 aaPredicted RBP7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 BCL11AQ9H165 835 aa7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 LMCD1Q9NZU5 365 aa7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 GMIPQ9P107 970 aa7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 CTNND2Q9UQB3 1225 aa7.03□□□□□ -1.28
RAB3IP-214ENST00000550847 RGS13O14921 159 aa7.02□□□□□ -1.29
RAB3IP-214ENST00000550847 FYB2Q5VWT5 728 aa7.02□□□□□ -1.29
RAB3IP-214ENST00000550847 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
RAB3IP-214ENST00000550847 NKD1Q969G9 470 aa7.02□□□□□ -1.29
RAB3IP-214ENST00000550847 ATG4CQ96DT6 458 aa7.02□□□□□ -1.29
RAB3IP-214ENST00000550847 GPR62Q9BZJ7 368 aa7.02□□□□□ -1.29
RAB3IP-214ENST00000550847 DDX41Q9UJV9 622 aaKnown RBP7.02□□□□□ -1.29
RAB3IP-214ENST00000550847 MCM4P33991 863 aa7.01□□□□□ -1.29
RAB3IP-214ENST00000550847 CDCP2Q5VXM1 449 aa7.01□□□□□ -1.29
RAB3IP-214ENST00000550847 REXO1Q8N1G1 1221 aaKnown RBP7.01□□□□□ -1.29
RAB3IP-214ENST00000550847 RNF34Q969K3 372 aa7.01□□□□□ -1.29
RAB3IP-214ENST00000550847 CNNM2Q9H8M5 875 aa7.01□□□□□ -1.29
RAB3IP-214ENST00000550847 DNAJC25-GNG10A0A024R161 153 aa7□□□□□ -1.29
RAB3IP-214ENST00000550847 RAG1P15918 1043 aa7□□□□□ -1.29
RAB3IP-214ENST00000550847 TPP2P29144 1249 aaPredicted RBP7□□□□□ -1.29
RAB3IP-214ENST00000550847 RALGPS1Q5JS13 557 aa7□□□□□ -1.29
RAB3IP-214ENST00000550847 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
RAB3IP-214ENST00000550847 SREK1Q8WXA9 508 aaKnown RBP7□□□□□ -1.29
RAB3IP-214ENST00000550847 DRC1Q96MC2 740 aa7□□□□□ -1.29
RAB3IP-214ENST00000550847 ASPNQ9BXN1 380 aa7□□□□□ -1.29
RAB3IP-214ENST00000550847 MEIS3P2A8K0S8 358 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 SCAMP3O14828 347 aaKnown RBP6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 GBP1P32455 592 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 HDLBPQ00341 1268 aaKnown RBP6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 C9orf131Q5VYM1 1079 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 OGFOD2Q6N063 350 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 TMPRSS7Q7RTY8 843 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 TSPYL5Q86VY4 417 aaPredicted RBP6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 TMEM40Q8WWA1 233 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 FAM168AQ92567 244 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 ASIC4Q96FT7 647 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 SLAMF8Q9P0V8 285 aa6.99□□□□□ -1.29
RAB3IP-214ENST00000550847 ACRP10323 421 aa6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 NME1P15531 152 aaKnown RBP6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 ZNF165P49910 485 aa6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 SNW1Q13573 536 aaKnown RBP6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 TMEM192Q8IY95 271 aa6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 ZNF512BQ96KM6 892 aaPredicted RBP6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 ALPK1Q96QP1 1244 aa6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 ZNRF3Q9ULT6 936 aa6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 PCDHA11Q9Y5I1 949 aa6.98□□□□□ -1.29
RAB3IP-214ENST00000550847 BIN1O00499 593 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 MLECQ14165 292 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 NBPF12Q5TAG4 269 aaPredicted RBP6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 TMC3Q7Z5M5 1100 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 SLC9A7Q96T83 725 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 ADAMTS10Q9H324 1103 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 TRIT1Q9H3H1 467 aaKnown RBP6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 GPATCH2Q9NW75 528 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 DUSP13Q9UII6 198 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 KCNH3Q9ULD8 1083 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 PPT2Q9UMR5 302 aa6.97□□□□□ -1.29
RAB3IP-214ENST00000550847 ZNF503-AS2A6NEH8 195 aa6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 TNFRSF10CO14798 259 aa6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 CANXP27824 592 aaKnown RBP6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 GDNFP39905 211 aa6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 ERVFC1P60507 584 aa6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 ZC3H6P61129 1189 aaKnown RBP6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 EGR3Q06889 387 aa6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 EBF1Q9UH73 591 aa6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 MINPP1Q9UNW1 487 aa6.96□□□□□ -1.3
RAB3IP-214ENST00000550847 FAM86C2PA6NEL3 165 aa6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 PAK2Q13177 524 aa6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 ZSWIM9Q86XI8 627 aa6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 NT5DC4Q86YG4 428 aa6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 SLC6A18Q96N87 628 aa6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 HDAC8Q9BY41 377 aa6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 SP110Q9HB58 689 aa6.95□□□□□ -1.3
RAB3IP-214ENST00000550847 HK2P52789 917 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 NMIQ13287 307 aaPredicted RBP6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 NBPF9Q3BBW0 867 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 CCDC81Q6ZN84 652 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 RUFY4Q6ZNE9 571 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 TTC6Q86TZ1 520 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 GOLGA2P5Q9HBQ8 144 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 TMEM59LQ9UK28 342 aa6.94□□□□□ -1.3
RAB3IP-214ENST00000550847 ZGLP1P0C6A0 271 aa6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 LTKP29376 864 aa6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 TRHRP34981 398 aaPredicted RBP6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 TXKP42681 527 aa6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 RNF4P78317 190 aa6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 TEKQ02763 1124 aa6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 RAD51AP2Q09MP3 1159 aa6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 ZYXQ15942 572 aaKnown RBP6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 LRRFIP1Q32MZ4 808 aaKnown RBP6.93□□□□□ -1.3
RAB3IP-214ENST00000550847 ZNF654Q8IZM8 581 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms