RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CEP350Q5VT06 3117 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 KLF18A0A0U1RQI7 1052 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 TSPY2A6NKD2 308 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 PFKFB2O60825 505 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 HLA-DOAP06340 250 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 VEGFAP15692 232 aaPredicted RBP9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 LIFRP42702 1097 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 FGD1P98174 961 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 TFAP4Q01664 338 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 WTAPQ15007 396 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 RCSD1Q6JBY9 416 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 APOA5Q6Q788 366 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 FAM83AQ86UY5 434 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 METTL16Q86W50 562 aaKnown RBP9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 RAB11FIP4Q86YS3 637 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 SMC1BQ8NDV3 1235 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 INTS4Q96HW7 963 aaKnown RBP9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 ZSCAN10Q96SZ4 725 aaPredicted RBP9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 DHX36Q9H2U1 1008 aaKnown RBP9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 IL17RBQ9NRM6 502 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 SWAP70Q9UH65 585 aa9.5□□□□□ -0.89
DEPDC4-207ENST00000549249 IGKV6D-41A0A0C4DH26 115 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 GLTPD2A6NH11 291 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 GOLGA8BA8MQT2 603 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 H7C1D1 291 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 MYO1BO43795 1136 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 CTDNEP1O95476 244 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 AKR1B1P15121 316 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 RXRAP19793 462 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 NT5C2P49902 561 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 SHROOM1Q2M3G4 852 aaPredicted RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 IQCA1Q86XH1 822 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 ZSCAN29Q8IWY8 852 aaPredicted RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 NEDD1Q8NHV4 660 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 UBAC1Q9BSL1 405 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 MYL10Q9BUA6 226 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 TMEM39BQ9GZU3 492 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 NCOA5Q9HCD5 579 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 FAM217BQ9NTX9 383 aaPredicted RBP9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 TCP11L1Q9NUJ3 509 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 PI4KBQ9UBF8 816 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 HACL1Q9UJ83 578 aa9.49□□□□□ -0.89
DEPDC4-207ENST00000549249 PAPPA2Q9BXP8 1791 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 ERICH2A1L162 156 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 TSPY3P0CV98 308 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 TSPY8P0CW00 308 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 CDC27P30260 824 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 NOVP48745 357 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 RRP1BQ14684 758 aaKnown RBP9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 SART3Q15020 963 aaKnown RBP9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 TATDN1Q6P1N9 297 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 NFXL1Q6ZNB6 911 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 CLEC10AQ8IUN9 316 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 FOXP4Q8IVH2 680 aaPredicted RBP9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 DNAJC5GQ8N7S2 189 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 NSUN7Q8NE18 718 aaKnown RBP9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 ANKS1AQ92625 1134 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 TEPSINQ96N21 525 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 KCNK17Q96T54 332 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 ZNF287Q9HBT7 754 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 GGA3Q9NZ52 723 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 NAP1L2Q9ULW6 460 aaPredicted RBP9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 DOCK1Q14185 1865 aa9.48□□□□□ -0.89
DEPDC4-207ENST00000549249 BAZ2BQ9UIF8 2168 aaKnown RBP9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 SSC5DA1L4H1 1573 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 OTOFQ9HC10 1997 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 CCDC69A6NI79 296 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 JAK2O60674 1132 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 GUCY1A2P33402 732 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 JAG1P78504 1218 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 PKP1Q13835 747 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 RASA3Q14644 834 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 IFIT1BQ5T764 474 aaKnown RBP9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 ANGEL2Q5VTE6 544 aaKnown RBP9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 MICU3Q86XE3 530 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 CRACR2BQ8N4Y2 399 aaPredicted RBP9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 SMARCC2Q8TAQ2 1214 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 KLRG1Q96E93 195 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 CEP95Q96GE4 821 aa9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 ADARB2Q9NS39 739 aaKnown RBP9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.47□□□□□ -0.89
DEPDC4-207ENST00000549249 TCHHQ07283 1943 aa9.46□□□□□ -0.89
DEPDC4-207ENST00000549249 GOLGA8AA7E2F4 631 aa9.46□□□□□ -0.9
DEPDC4-207ENST00000549249 POTECB2RU33 542 aa9.46□□□□□ -0.9
DEPDC4-207ENST00000549249 ZBTB43O43298 467 aa9.46□□□□□ -0.9
DEPDC4-207ENST00000549249 GJB2P29033 226 aa9.46□□□□□ -0.9
DEPDC4-207ENST00000549249 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
DEPDC4-207ENST00000549249 TNNI2P48788 182 aa9.46□□□□□ -0.9
DEPDC4-207ENST00000549249 METAP2P50579 478 aaKnown RBP eCLIP9.46□□□□□ -0.9
DEPDC4-207ENST00000549249 RCAN1P53805 252 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms