RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CATSPERGQ6ZRH7 1159 aa22.64■■□□□ 1.21
DDX55-211ENST00000544429 A0A0G2JMZ2 1700 aa22.64■■□□□ 1.21
DDX55-211ENST00000544429 MGAMO43451 1857 aa22.64■■□□□ 1.21
DDX55-211ENST00000544429 ZSWIM8A7E2V4 1837 aa22.64■■□□□ 1.21
DDX55-211ENST00000544429 TSPY2A6NKD2 308 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L15C9J2P7 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L13C9JLJ4 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L11C9JVI0 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L18D6R9N7 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L22D6RA61 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L17D6RBQ6 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L19D6RCP7 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L20D6RJB6 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 RANBP6O60518 1105 aaKnown RBP22.63■■□□□ 1.21
DDX55-211ENST00000544429 USP17L24Q0WX57 530 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 CPA4Q9UI42 421 aa22.63■■□□□ 1.21
DDX55-211ENST00000544429 HTTP42858 3142 aa22.62■■□□□ 1.21
DDX55-211ENST00000544429 NMT2O60551 498 aa22.62■■□□□ 1.21
DDX55-211ENST00000544429 OSBPP22059 807 aa22.62■■□□□ 1.21
DDX55-211ENST00000544429 GCLCP48506 637 aaPredicted RBP22.62■■□□□ 1.21
DDX55-211ENST00000544429 LBX2Q6XYB7 198 aa22.62■■□□□ 1.21
DDX55-211ENST00000544429 P2RX7Q99572 595 aaKnown RBP22.62■■□□□ 1.21
DDX55-211ENST00000544429 RPAP3Q9H6T3 665 aaPredicted RBP22.62■■□□□ 1.21
DDX55-211ENST00000544429 CLIP2Q9UDT6 1046 aa22.62■■□□□ 1.21
DDX55-211ENST00000544429 RBM8AQ9Y5S9 174 aaKnown RBP22.62■■□□□ 1.21
DDX55-211ENST00000544429 TAF6LQ9Y6J9 622 aa22.62■■□□□ 1.21
DDX55-211ENST00000544429 HERVK_113P62684 666 aa22.61■■□□□ 1.21
DDX55-211ENST00000544429 PPP4R3BQ5MIZ7 849 aa22.61■■□□□ 1.21
DDX55-211ENST00000544429 CASC1Q6TDU7 716 aa22.61■■□□□ 1.21
DDX55-211ENST00000544429 SMCR8Q8TEV9 937 aaPredicted RBP22.61■■□□□ 1.21
DDX55-211ENST00000544429 GOPCQ9HD26 462 aa22.61■■□□□ 1.21
DDX55-211ENST00000544429 WDR46O15213 610 aaKnown RBP22.6■■□□□ 1.21
DDX55-211ENST00000544429 IRX3P78415 501 aaPredicted RBP22.6■■□□□ 1.21
DDX55-211ENST00000544429 LACTBP83111 547 aaPredicted RBP22.6■■□□□ 1.21
DDX55-211ENST00000544429 ATP2B2Q01814 1243 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 NECTIN1Q15223 517 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 FAM110CQ1W6H9 321 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 RRP12Q5JTH9 1297 aaKnown RBP22.6■■□□□ 1.21
DDX55-211ENST00000544429 RCSD1Q6JBY9 416 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 KIAA1211Q6ZU35 1233 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 SPICE1Q8N0Z3 855 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 GMCL1P1Q8NEA9 526 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 ESR2Q92731 530 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 ERO1AQ96HE7 468 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 MORF4L1Q9UBU8 362 aa22.6■■□□□ 1.21
DDX55-211ENST00000544429 F5H6K3 240 aa22.59■■□□□ 1.21
DDX55-211ENST00000544429 NDUFB10O96000 172 aa22.59■■□□□ 1.21
DDX55-211ENST00000544429 KLRC3Q07444 240 aa22.59■■□□□ 1.21
DDX55-211ENST00000544429 CD99L2Q8TCZ2 262 aa22.59■■□□□ 1.21
DDX55-211ENST00000544429 CNNM2Q9H8M5 875 aa22.59■■□□□ 1.21
DDX55-211ENST00000544429 TOMM22Q9NS69 142 aa22.59■■□□□ 1.21
DDX55-211ENST00000544429 B4E1Z4 1266 aa22.58■■□□□ 1.21
DDX55-211ENST00000544429 CTGFP29279 349 aa22.58■■□□□ 1.21
DDX55-211ENST00000544429 CTU1Q7Z7A3 348 aaKnown RBP22.58■■□□□ 1.21
DDX55-211ENST00000544429 GTF3C2Q8WUA4 911 aaPredicted RBP22.58■■□□□ 1.21
DDX55-211ENST00000544429 KRT23Q9C075 422 aa22.58■■□□□ 1.21
DDX55-211ENST00000544429 TXNRD2Q9NNW7 524 aa22.58■■□□□ 1.21
DDX55-211ENST00000544429 ANO2Q9NQ90 1003 aa22.58■■□□□ 1.21
DDX55-211ENST00000544429 ZSWIM5Q9P217 1185 aa22.58■■□□□ 1.21
DDX55-211ENST00000544429 RBPJLQ9UBG7 517 aa22.58■■□□□ 1.21
DDX55-211ENST00000544429 DOCK3Q8IZD9 2030 aa22.58■■□□□ 1.2
DDX55-211ENST00000544429 MYPNQ86TC9 1320 aa22.57■■□□□ 1.2
DDX55-211ENST00000544429 SPDYE16A6NNV3 312 aaPredicted RBP22.57■■□□□ 1.2
DDX55-211ENST00000544429 KDM4AO75164 1064 aa22.57■■□□□ 1.2
DDX55-211ENST00000544429 COG2Q14746 738 aa22.57■■□□□ 1.2
DDX55-211ENST00000544429 STOX1Q6ZVD7 989 aa22.57■■□□□ 1.2
DDX55-211ENST00000544429 LRRC47Q8N1G4 583 aaKnown RBP22.57■■□□□ 1.2
DDX55-211ENST00000544429 ANKRD13CQ8N6S4 541 aa22.57■■□□□ 1.2
DDX55-211ENST00000544429 TTC14Q96N46 770 aa22.57■■□□□ 1.2
DDX55-211ENST00000544429 ADAMTS5Q9UNA0 930 aa22.57■■□□□ 1.2
DDX55-211ENST00000544429 COL11A1P12107 1806 aaPredicted RBP22.57■■□□□ 1.2
DDX55-211ENST00000544429 E7EWF7 191 aa22.56■■□□□ 1.2
DDX55-211ENST00000544429 CNMDO75829 334 aa22.56■■□□□ 1.2
DDX55-211ENST00000544429 OTOP1Q7RTM1 612 aa22.56■■□□□ 1.2
DDX55-211ENST00000544429 ANKS1AQ92625 1134 aa22.56■■□□□ 1.2
DDX55-211ENST00000544429 GMCL1Q96IK5 515 aa22.56■■□□□ 1.2
DDX55-211ENST00000544429 ARHGAP39Q9C0H5 1083 aa22.56■■□□□ 1.2
DDX55-211ENST00000544429 STX8Q9UNK0 236 aa22.56■■□□□ 1.2
DDX55-211ENST00000544429 SLC27A2O14975 620 aa22.55■■□□□ 1.2
DDX55-211ENST00000544429 DGKHQ86XP1 1220 aa22.55■■□□□ 1.2
DDX55-211ENST00000544429 TMEM47Q9BQJ4 181 aa22.55■■□□□ 1.2
DDX55-211ENST00000544429 TANGO6Q9C0B7 1094 aa22.55■■□□□ 1.2
DDX55-211ENST00000544429 HOXC10Q9NYD6 342 aa22.55■■□□□ 1.2
DDX55-211ENST00000544429 RABGAP1Q9Y3P9 1069 aa22.55■■□□□ 1.2
DDX55-211ENST00000544429 GNRH1P01148 92 aa22.54■■□□□ 1.2
DDX55-211ENST00000544429 TOP1P11387 765 aaKnown RBP22.54■■□□□ 1.2
DDX55-211ENST00000544429 DSG3P32926 999 aa22.54■■□□□ 1.2
DDX55-211ENST00000544429 FAM83BQ5T0W9 1011 aa22.54■■□□□ 1.2
DDX55-211ENST00000544429 CREB3L3Q68CJ9 461 aa22.54■■□□□ 1.2
DDX55-211ENST00000544429 TRIM47Q96LD4 638 aa22.54■■□□□ 1.2
DDX55-211ENST00000544429 NUP88Q99567 741 aaPredicted RBP22.54■■□□□ 1.2
DDX55-211ENST00000544429 PEX10O60683 326 aa22.53■■□□□ 1.2
DDX55-211ENST00000544429 PKN2Q16513 984 aaKnown RBP22.53■■□□□ 1.2
DDX55-211ENST00000544429 CCDC178Q5BJE1 867 aa22.53■■□□□ 1.2
DDX55-211ENST00000544429 CYB5R4Q7L1T6 521 aa22.53■■□□□ 1.2
DDX55-211ENST00000544429 IQCA1Q86XH1 822 aa22.53■■□□□ 1.2
DDX55-211ENST00000544429 ZSCAN10Q96SZ4 725 aaPredicted RBP22.53■■□□□ 1.2
DDX55-211ENST00000544429 FBXO28Q9NVF7 368 aa22.53■■□□□ 1.2
DDX55-211ENST00000544429 CENPFP49454 3210 aa22.53■■□□□ 1.2
DDX55-211ENST00000544429 PLXNB2O15031 1838 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms