RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SLC27A2O14975 620 aa22.93■■□□□ 1.26
DDX55-207ENST00000540763 TRDNQ13061 729 aa22.93■■□□□ 1.26
DDX55-207ENST00000540763 DGKZQ13574 1117 aa22.93■■□□□ 1.26
DDX55-207ENST00000540763 CREB3L3Q68CJ9 461 aa22.93■■□□□ 1.26
DDX55-207ENST00000540763 PARK7Q99497 189 aaKnown RBP22.93■■□□□ 1.26
DDX55-207ENST00000540763 ZFYVE28Q9HCC9 887 aa22.93■■□□□ 1.26
DDX55-207ENST00000540763 GOPCQ9HD26 462 aa22.93■■□□□ 1.26
DDX55-207ENST00000540763 IL17RBQ9NRM6 502 aa22.93■■□□□ 1.26
DDX55-207ENST00000540763 RLFQ13129 1914 aa22.92■■□□□ 1.26
DDX55-207ENST00000540763 E7EWF7 191 aa22.92■■□□□ 1.26
DDX55-207ENST00000540763 VCAM1P19320 739 aa22.92■■□□□ 1.26
DDX55-207ENST00000540763 MLLT1Q03111 559 aaPredicted RBP22.92■■□□□ 1.26
DDX55-207ENST00000540763 TREML2Q5T2D2 321 aa22.92■■□□□ 1.26
DDX55-207ENST00000540763 IQCA1Q86XH1 822 aa22.92■■□□□ 1.26
DDX55-207ENST00000540763 TTC14Q96N46 770 aa22.92■■□□□ 1.26
DDX55-207ENST00000540763 B4E1Z4 1266 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 KDM4AO75164 1064 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 RGS19P49795 217 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 CRHR2Q13324 411 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 ZYXQ15942 572 aaKnown RBP22.91■■□□□ 1.26
DDX55-207ENST00000540763 TSGA10IPQ3SY00 556 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 RALYLQ86SE5 291 aaKnown RBP22.91■■□□□ 1.26
DDX55-207ENST00000540763 GMCL1P1Q8NEA9 526 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 NCOA7Q8NI08 942 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 CLIP2Q9UDT6 1046 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 A0A0G2JMZ2 1700 aa22.91■■□□□ 1.26
DDX55-207ENST00000540763 ADGRA2Q96PE1 1338 aa22.9■■□□□ 1.26
DDX55-207ENST00000540763 WDR46O15213 610 aaKnown RBP22.9■■□□□ 1.26
DDX55-207ENST00000540763 TLR2O60603 784 aa22.9■■□□□ 1.26
DDX55-207ENST00000540763 OSBPP22059 807 aa22.9■■□□□ 1.26
DDX55-207ENST00000540763 ATP2B2Q01814 1243 aa22.9■■□□□ 1.26
DDX55-207ENST00000540763 ZSWIM5Q9P217 1185 aa22.9■■□□□ 1.26
DDX55-207ENST00000540763 STOX1Q6ZVD7 989 aa22.89■■□□□ 1.25
DDX55-207ENST00000540763 DGKHQ86XP1 1220 aa22.89■■□□□ 1.25
DDX55-207ENST00000540763 KCNB2Q92953 911 aa22.89■■□□□ 1.25
DDX55-207ENST00000540763 STX8Q9UNK0 236 aa22.89■■□□□ 1.25
DDX55-207ENST00000540763 USP17L15C9J2P7 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L13C9JLJ4 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L11C9JVI0 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L18D6R9N7 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L22D6RA61 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L17D6RBQ6 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L19D6RCP7 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L20D6RJB6 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 NMT2O60551 498 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 ZKSCAN1P17029 563 aaPredicted RBP22.88■■□□□ 1.25
DDX55-207ENST00000540763 HSPA4P34932 840 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 USP17L24Q0WX57 530 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 GTF3C2Q8WUA4 911 aaPredicted RBP22.88■■□□□ 1.25
DDX55-207ENST00000540763 MTA3Q9BTC8 594 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 TAF6LQ9Y6J9 622 aa22.88■■□□□ 1.25
DDX55-207ENST00000540763 TBC1D8O95759 1140 aa22.87■■□□□ 1.25
DDX55-207ENST00000540763 TOP1P11387 765 aaKnown RBP22.87■■□□□ 1.25
DDX55-207ENST00000540763 IRX3P78415 501 aaPredicted RBP22.87■■□□□ 1.25
DDX55-207ENST00000540763 KRT32Q14532 448 aa22.87■■□□□ 1.25
DDX55-207ENST00000540763 CATSPERGQ6ZRH7 1159 aa22.87■■□□□ 1.25
DDX55-207ENST00000540763 NKX2-3Q8TAU0 364 aa22.87■■□□□ 1.25
DDX55-207ENST00000540763 ANKS1AQ92625 1134 aa22.87■■□□□ 1.25
DDX55-207ENST00000540763 ASCC2Q9H1I8 757 aaPredicted RBP22.87■■□□□ 1.25
DDX55-207ENST00000540763 RPAP3Q9H6T3 665 aaPredicted RBP22.87■■□□□ 1.25
DDX55-207ENST00000540763 MYPNQ86TC9 1320 aa22.86■■□□□ 1.25
DDX55-207ENST00000540763 MGAMO43451 1857 aa22.86■■□□□ 1.25
DDX55-207ENST00000540763 F5H6K3 240 aa22.86■■□□□ 1.25
DDX55-207ENST00000540763 KLRC3Q07444 240 aa22.86■■□□□ 1.25
DDX55-207ENST00000540763 KIAA1755Q5JYT7 1200 aa22.86■■□□□ 1.25
DDX55-207ENST00000540763 RCSD1Q6JBY9 416 aa22.86■■□□□ 1.25
DDX55-207ENST00000540763 MB21D2Q8IYB1 491 aaPredicted RBP22.86■■□□□ 1.25
DDX55-207ENST00000540763 ZSCAN10Q96SZ4 725 aaPredicted RBP22.86■■□□□ 1.25
DDX55-207ENST00000540763 UBAC1Q9BSL1 405 aa22.86■■□□□ 1.25
DDX55-207ENST00000540763 TNKSO95271 1327 aa22.85■■□□□ 1.25
DDX55-207ENST00000540763 GPR25O00155 361 aa22.85■■□□□ 1.25
DDX55-207ENST00000540763 NDUFB10O96000 172 aa22.85■■□□□ 1.25
DDX55-207ENST00000540763 CYP2C8P10632 490 aa22.85■■□□□ 1.25
DDX55-207ENST00000540763 GCLCP48506 637 aaPredicted RBP22.85■■□□□ 1.25
DDX55-207ENST00000540763 LBX2Q6XYB7 198 aa22.85■■□□□ 1.25
DDX55-207ENST00000540763 LRRC47Q8N1G4 583 aaKnown RBP22.85■■□□□ 1.25
DDX55-207ENST00000540763 SMCR8Q8TEV9 937 aaPredicted RBP22.85■■□□□ 1.25
DDX55-207ENST00000540763 GMCL1Q96IK5 515 aa22.85■■□□□ 1.25
DDX55-207ENST00000540763 USP26Q9BXU7 913 aa22.85■■□□□ 1.25
DDX55-207ENST00000540763 MCCP23508 829 aa22.84■■□□□ 1.25
DDX55-207ENST00000540763 SART3Q15020 963 aaKnown RBP22.84■■□□□ 1.25
DDX55-207ENST00000540763 C17orf99Q6UX52 265 aa22.84■■□□□ 1.25
DDX55-207ENST00000540763 CYB5R4Q7L1T6 521 aa22.84■■□□□ 1.25
DDX55-207ENST00000540763 SPICE1Q8N0Z3 855 aa22.84■■□□□ 1.25
DDX55-207ENST00000540763 ENAHQ8N8S7 591 aaPredicted RBP22.84■■□□□ 1.25
DDX55-207ENST00000540763 TMEM47Q9BQJ4 181 aa22.84■■□□□ 1.25
DDX55-207ENST00000540763 R3HDMLQ9H3Y0 253 aa22.84■■□□□ 1.25
DDX55-207ENST00000540763 COL11A1P12107 1806 aaPredicted RBP22.84■■□□□ 1.25
DDX55-207ENST00000540763 WDR19Q8NEZ3 1342 aa22.83■■□□□ 1.25
DDX55-207ENST00000540763 BCRP11274 1271 aa22.83■■□□□ 1.25
DDX55-207ENST00000540763 HERVK_113P62684 666 aa22.83■■□□□ 1.25
DDX55-207ENST00000540763 SEC23AQ15436 765 aa22.83■■□□□ 1.25
DDX55-207ENST00000540763 ZKSCAN3Q9BRR0 538 aa22.83■■□□□ 1.25
DDX55-207ENST00000540763 TANGO6Q9C0B7 1094 aa22.83■■□□□ 1.25
DDX55-207ENST00000540763 ERICH2A1L162 156 aa22.82■■□□□ 1.24
DDX55-207ENST00000540763 HMGB1P09429 215 aaKnown RBP22.82■■□□□ 1.24
DDX55-207ENST00000540763 MCM5P33992 734 aa22.82■■□□□ 1.24
DDX55-207ENST00000540763 COG2Q14746 738 aa22.82■■□□□ 1.24
DDX55-207ENST00000540763 FAM110CQ1W6H9 321 aa22.82■■□□□ 1.24
DDX55-207ENST00000540763 C8orf34Q49A92 452 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms