RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MORC3Q14149 939 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 NPY5RQ15761 445 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
C11orf54-214ENST00000540113 DYNLL2Q96FJ2 89 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 TMX1Q9H3N1 280 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 VWA3AA6NCI4 1184 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 PCP11498 1178 aaKnown RBP13.15□□□□□ -0.3
C11orf54-214ENST00000540113 SARSP49591 514 aaKnown RBP13.15□□□□□ -0.3
C11orf54-214ENST00000540113 ADKP55263 362 aaKnown RBP13.15□□□□□ -0.3
C11orf54-214ENST00000540113 PRR5LQ6MZQ0 368 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
C11orf54-214ENST00000540113 KIF18AQ8NI77 898 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 ZMYND15Q9H091 742 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 ATP8A2Q9NTI2 1148 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 CEP131Q9UPN4 1083 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
C11orf54-214ENST00000540113 CBFA2T2O43439 604 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
C11orf54-214ENST00000540113 XBP1P17861 261 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 PIK3AP1Q6ZUJ8 805 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 HOMER1Q86YM7 354 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 ANKIB1Q9P2G1 1089 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
C11orf54-214ENST00000540113 TSPY2A6NKD2 308 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 TMEM132AQ24JP5 1023 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 DZIP1Q86YF9 867 aaKnown RBP13.14□□□□□ -0.31
C11orf54-214ENST00000540113 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
C11orf54-214ENST00000540113 BLZF1Q9H2G9 400 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
C11orf54-214ENST00000540113 CDK5RAP2Q96SN8 1893 aa13.14□□□□□ -0.31
C11orf54-214ENST00000540113 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
C11orf54-214ENST00000540113 DDAH1O94760 285 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 CDC25AP30304 524 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 PTGDRQ13258 359 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 ELF2Q15723 593 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
C11orf54-214ENST00000540113 CTCFLQ8NI51 663 aaPredicted RBP13.13□□□□□ -0.31
C11orf54-214ENST00000540113 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
C11orf54-214ENST00000540113 XDHP47989 1333 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 MCM7P33993 719 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 NLRP5P59047 1200 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 RASGRP4Q8TDF6 673 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 TNFRSF25Q93038 417 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
C11orf54-214ENST00000540113 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
C11orf54-214ENST00000540113 FANCGO15287 622 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 GPSM2P81274 684 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
C11orf54-214ENST00000540113 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 STAG2Q8N3U4 1231 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
C11orf54-214ENST00000540113 KCND1Q9NSA2 647 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 DNAI1Q9UI46 699 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
C11orf54-214ENST00000540113 TEX33O43247 280 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
C11orf54-214ENST00000540113 CALM1P0DP23 149 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 CALM2P0DP24 149 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 CALM3P0DP25 149 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 GYS1P13807 737 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 ZNF18P17022 549 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 TFAP4Q01664 338 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 IL17AQ16552 155 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 TMEM139Q8IV31 216 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 SLC44A5Q8NCS7 719 aa13.12□□□□□ -0.31
C11orf54-214ENST00000540113 USP17L3A6NCW0 530 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 USP17L4A6NCW7 530 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 USP17L1Q7RTZ2 530 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 WDR66Q8TBY9 1149 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 ENOX1Q8TC92 643 aaKnown RBP13.11□□□□□ -0.31
C11orf54-214ENST00000540113 CPLX3Q8WVH0 158 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
C11orf54-214ENST00000540113 NRDCO43847 1150 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 SCG2P13521 617 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 USP5P45974 858 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 PLCD1P51178 756 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 DPYDQ12882 1025 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
C11orf54-214ENST00000540113 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
C11orf54-214ENST00000540113 REXO1L1PQ8IX06 675 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 CPVLQ9H3G5 476 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 BRMS1Q9HCU9 246 aa13.11□□□□□ -0.31
C11orf54-214ENST00000540113 DDX60LQ5H9U9 1706 aaKnown RBP13.1□□□□□ -0.31
C11orf54-214ENST00000540113 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 SLU7O95391 586 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms