RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SLC15A5A6NIM6 579 aa18.13■□□□□ 0.49
USB1-203ENST00000539737 POTEB2H3BUK9 544 aa18.13■□□□□ 0.49
USB1-203ENST00000539737 GRB14Q14449 540 aa18.13■□□□□ 0.49
USB1-203ENST00000539737 SHHQ15465 462 aa18.13■□□□□ 0.49
USB1-203ENST00000539737 TRMT44Q8IYL2 757 aaKnown RBP18.13■□□□□ 0.49
USB1-203ENST00000539737 FERMT2Q96AC1 680 aa18.13■□□□□ 0.49
USB1-203ENST00000539737 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
USB1-203ENST00000539737 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
USB1-203ENST00000539737 GPR108Q9NPR9 543 aa18.13■□□□□ 0.49
USB1-203ENST00000539737 COBLO75128 1261 aa18.12■□□□□ 0.49
USB1-203ENST00000539737 CYBAP13498 195 aa18.12■□□□□ 0.49
USB1-203ENST00000539737 TRIM60Q495X7 471 aa18.12■□□□□ 0.49
USB1-203ENST00000539737 KIAA1683Q9H0B3 1180 aa18.12■□□□□ 0.49
USB1-203ENST00000539737 EXOC6BQ9Y2D4 811 aa18.12■□□□□ 0.49
USB1-203ENST00000539737 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
USB1-203ENST00000539737 MPHOSPH10O00566 681 aaKnown RBP18.11■□□□□ 0.49
USB1-203ENST00000539737 CHGBP05060 677 aa18.11■□□□□ 0.49
USB1-203ENST00000539737 ADORA2AP29274 412 aa18.11■□□□□ 0.49
USB1-203ENST00000539737 HSP90AB4PQ58FF6 505 aa18.11■□□□□ 0.49
USB1-203ENST00000539737 ERC1Q8IUD2 1116 aa18.11■□□□□ 0.49
USB1-203ENST00000539737 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
USB1-203ENST00000539737 LPAR1Q92633 364 aa18.11■□□□□ 0.49
USB1-203ENST00000539737 LENG1Q96BZ8 264 aaPredicted RBP18.11■□□□□ 0.49
USB1-203ENST00000539737 RIOK1Q9BRS2 568 aaKnown RBP18.11■□□□□ 0.49
USB1-203ENST00000539737 A0A0G2JMZ2 1700 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 IGHA2P01877 340 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 ITGB8P26012 769 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 CCNA1P78396 465 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 SPICE1Q8N0Z3 855 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
USB1-203ENST00000539737 BADQ92934 168 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 DYNLL2Q96FJ2 89 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 ZNF512BQ96KM6 892 aaPredicted RBP18.1■□□□□ 0.49
USB1-203ENST00000539737 TANGO6Q9C0B7 1094 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 IL1RAPL2Q9NP60 686 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 GINM1Q9NU53 330 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 IVNS1ABPQ9Y6Y0 642 aa18.1■□□□□ 0.49
USB1-203ENST00000539737 CYP2D7A0A087X1C5 515 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 DNM1LO00429 736 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 POLR3DP05423 398 aaPredicted RBP18.09■□□□□ 0.49
USB1-203ENST00000539737 HOXC6P09630 235 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 ERCC3P19447 782 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 ADCYAP1R1P41586 468 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 PLS1Q14651 629 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 FAM47AQ5JRC9 791 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 DPP9Q86TI2 863 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 AACSQ86V21 672 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 MYLIPQ8WY64 445 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 CDX2Q99626 313 aaPredicted RBP18.09■□□□□ 0.49
USB1-203ENST00000539737 EHD4Q9H223 541 aa18.09■□□□□ 0.49
USB1-203ENST00000539737 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.49
USB1-203ENST00000539737 TRIM43BA6NCK2 446 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 APBB1O00213 710 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 GLRX3O76003 335 aaKnown RBP18.08■□□□□ 0.48
USB1-203ENST00000539737 USP14P54578 494 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 LBX2Q6XYB7 198 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 SLC39A5Q6ZMH5 540 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 LCORLQ8N3X6 602 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 TRIM43Q96BQ3 446 aaPredicted RBP18.08■□□□□ 0.48
USB1-203ENST00000539737 ATG4CQ96DT6 458 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 TTYH1Q9H313 450 aaPredicted RBP18.08■□□□□ 0.48
USB1-203ENST00000539737 CABP5Q9NP86 173 aa18.08■□□□□ 0.48
USB1-203ENST00000539737 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 PRKAB2O43741 272 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 EPHB4P54760 987 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 GABPAQ06546 454 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 ZNF697Q5TEC3 545 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 SIAH1Q8IUQ4 282 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 CRBNQ96SW2 442 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 SPATC1LQ9H0A9 340 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 PDLIM7Q9NR12 457 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 BAZ2AQ9UIF9 1905 aaKnown RBP18.07■□□□□ 0.48
USB1-203ENST00000539737 COL11A1P12107 1806 aaPredicted RBP18.07■□□□□ 0.48
USB1-203ENST00000539737 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 TTC28Q96AY4 2481 aa18.07■□□□□ 0.48
USB1-203ENST00000539737 IGSF3O75054 1194 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 PGK2P07205 417 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 AKR1B1P15121 316 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 PDE6AP16499 860 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
USB1-203ENST00000539737 AAMPQ13685 434 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 TTC6Q86TZ1 520 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 NCAPG2Q86XI2 1143 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 SIRT2Q8IXJ6 389 aa18.06■□□□□ 0.48
USB1-203ENST00000539737 PARP14Q460N5 1801 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 ZNF532Q9HCE3 1301 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 MAP3K12Q12852 859 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 LRRC41Q15345 812 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
USB1-203ENST00000539737 SEMA6BQ9H3T3 888 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 FBXO28Q9NVF7 368 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 PRKAG2Q9UGJ0 569 aa18.05■□□□□ 0.48
USB1-203ENST00000539737 ZNFX1Q9P2E3 1918 aaKnown RBP18.05■□□□□ 0.48
USB1-203ENST00000539737 MYH8P13535 1937 aa18.04■□□□□ 0.48
USB1-203ENST00000539737 KBTBD13C9JR72 458 aa18.04■□□□□ 0.48
USB1-203ENST00000539737 PGK1P00558 417 aa18.04■□□□□ 0.48
USB1-203ENST00000539737 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
USB1-203ENST00000539737 COG2Q14746 738 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms