RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 ANTXR1Q9H6X2 564 aa12.99□□□□□ -0.33
C11orf54-209ENST00000530620 SZT2Q5T011 3432 aa12.98□□□□□ -0.33
C11orf54-209ENST00000530620 GH2P01242 217 aa12.98□□□□□ -0.33
C11orf54-209ENST00000530620 USP5P45974 858 aa12.98□□□□□ -0.33
C11orf54-209ENST00000530620 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
C11orf54-209ENST00000530620 AACSQ86V21 672 aa12.98□□□□□ -0.33
C11orf54-209ENST00000530620 PANK1Q8TE04 598 aa12.98□□□□□ -0.33
C11orf54-209ENST00000530620 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
C11orf54-209ENST00000530620 COL11A1P12107 1806 aaPredicted RBP12.97□□□□□ -0.33
C11orf54-209ENST00000530620 ZNF236Q9UL36 1845 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 RPTORQ8N122 1335 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 CAPN2P17655 700 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 CYP2B6P20813 491 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 ERVK-9P63128 1117 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 ERVK-24P63145 666 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
C11orf54-209ENST00000530620 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 TATDN1Q6P1N9 297 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 SOCS4Q8WXH5 440 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 FEZ1Q99689 392 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 PAGR1Q9BTK6 254 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 EHD4Q9H223 541 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 PORCNQ9H237 461 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
C11orf54-209ENST00000530620 RBPJLQ9UBG7 517 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
C11orf54-209ENST00000530620 MAP3K12Q12852 859 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 Q3C1V9 767 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 NECAB2Q7Z6G3 386 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 CERS3Q8IU89 383 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 ANKLE1Q8NAG6 615 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 C12orf42Q96LP6 360 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 EPAS1Q99814 870 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 NUDT12Q9BQG2 462 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 RIOK1Q9BRS2 568 aaKnown RBP12.96□□□□□ -0.33
C11orf54-209ENST00000530620 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.33
C11orf54-209ENST00000530620 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 MAPK4P31152 587 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 PBX2P40425 430 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 USP6NLQ92738 828 aa12.95□□□□□ -0.34
C11orf54-209ENST00000530620 ZNFX1Q9P2E3 1918 aaKnown RBP12.95□□□□□ -0.34
C11orf54-209ENST00000530620 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 CNMDO75829 334 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 XRCC5P13010 732 aaKnown RBP12.94□□□□□ -0.34
C11orf54-209ENST00000530620 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
C11orf54-209ENST00000530620 VCAM1P19320 739 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 SHMT1P34896 483 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 PLCD1P51178 756 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 NBR1Q14596 966 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 CCL14Q16627 93 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 ABCB5Q2M3G0 1257 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 MORN1Q5T089 497 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 TTC6Q86TZ1 520 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 ACER1Q8TDN7 264 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 GTF3C2Q8WUA4 911 aaPredicted RBP12.94□□□□□ -0.34
C11orf54-209ENST00000530620 APBA2Q99767 749 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
C11orf54-209ENST00000530620 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 A0A1W2PPC1 479 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 APBB1O00213 710 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 SOX1O00570 391 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-209ENST00000530620 PDE6AP16499 860 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 RGS2P41220 211 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 CACNB2Q08289 660 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-209ENST00000530620 CERKLQ49MI3 558 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-209ENST00000530620 TMED8Q6PL24 325 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-209ENST00000530620 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 CCAR1Q8IX12 1150 aaKnown RBP12.93□□□□□ -0.34
C11orf54-209ENST00000530620 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 KIAA1683Q9H0B3 1180 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 C11orf49Q9H6J7 331 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 ZMYND8Q9ULU4 1186 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-209ENST00000530620 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
C11orf54-209ENST00000530620 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 PFASO15067 1338 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 GREB1LQ9C091 1923 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 CCND3P30281 292 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP14P54578 494 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms