RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 USP17L24Q0WX57 530 aa17.88■□□□□ 0.45
SF3B2-202ENST00000524475 CLEC10AQ8IUN9 316 aa17.88■□□□□ 0.45
SF3B2-202ENST00000524475 SMCR8Q8TEV9 937 aaPredicted RBP17.88■□□□□ 0.45
SF3B2-202ENST00000524475 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
SF3B2-202ENST00000524475 WDR46O15213 610 aaKnown RBP17.87■□□□□ 0.45
SF3B2-202ENST00000524475 RANBP6O60518 1105 aaKnown RBP17.87■□□□□ 0.45
SF3B2-202ENST00000524475 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
SF3B2-202ENST00000524475 ZYXQ15942 572 aaKnown RBP17.87■□□□□ 0.45
SF3B2-202ENST00000524475 FAM110CQ1W6H9 321 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 FAM47AQ5JRC9 791 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 COL13A1Q5TAT6 717 aaPredicted RBP17.87■□□□□ 0.45
SF3B2-202ENST00000524475 LBX2Q6XYB7 198 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 CATSPERGQ6ZRH7 1159 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 ESR2Q92731 530 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 LSG1Q9H089 658 aaKnown RBP17.87■□□□□ 0.45
SF3B2-202ENST00000524475 CNNM2Q9H8M5 875 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 INCENPQ9NQS7 918 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 RLFQ13129 1914 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 MYPNQ86TC9 1320 aa17.87■□□□□ 0.45
SF3B2-202ENST00000524475 PARP14Q460N5 1801 aa17.86■□□□□ 0.45
SF3B2-202ENST00000524475 HERVK_113P62684 666 aa17.86■□□□□ 0.45
SF3B2-202ENST00000524475 ARHGEF6Q15052 776 aa17.86■□□□□ 0.45
SF3B2-202ENST00000524475 CTU1Q7Z7A3 348 aaKnown RBP17.86■□□□□ 0.45
SF3B2-202ENST00000524475 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
SF3B2-202ENST00000524475 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
SF3B2-202ENST00000524475 IL17RBQ9NRM6 502 aa17.86■□□□□ 0.45
SF3B2-202ENST00000524475 MORF4L1Q9UBU8 362 aa17.86■□□□□ 0.45
SF3B2-202ENST00000524475 NEDD4P46934 1319 aa17.86■□□□□ 0.45
SF3B2-202ENST00000524475 A0A0G2JMZ2 1700 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 GNRH1P01148 92 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 CYP21A2P08686 494 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 HTTP42858 3142 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 LACTBP83111 547 aaPredicted RBP17.85■□□□□ 0.45
SF3B2-202ENST00000524475 KIAA1755Q5JYT7 1200 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 TTC14Q96N46 770 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 KRT23Q9C075 422 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 CPA4Q9UI42 421 aa17.85■□□□□ 0.45
SF3B2-202ENST00000524475 ATP2B2Q01814 1243 aa17.84■□□□□ 0.45
SF3B2-202ENST00000524475 PKN2Q16513 984 aaKnown RBP17.84■□□□□ 0.45
SF3B2-202ENST00000524475 CCDC178Q5BJE1 867 aa17.84■□□□□ 0.45
SF3B2-202ENST00000524475 RRP12Q5JTH9 1297 aaKnown RBP17.84■□□□□ 0.45
SF3B2-202ENST00000524475 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
SF3B2-202ENST00000524475 TOMM22Q9NS69 142 aa17.84■□□□□ 0.45
SF3B2-202ENST00000524475 CLIP2Q9UDT6 1046 aa17.84■□□□□ 0.45
SF3B2-202ENST00000524475 RBM8AQ9Y5S9 174 aaKnown RBP17.84■□□□□ 0.45
SF3B2-202ENST00000524475 MGAMO43451 1857 aa17.84■□□□□ 0.45
SF3B2-202ENST00000524475 F5H6K3 240 aa17.83■□□□□ 0.44
SF3B2-202ENST00000524475 KLRC3Q07444 240 aa17.83■□□□□ 0.44
SF3B2-202ENST00000524475 COG2Q14746 738 aa17.83■□□□□ 0.44
SF3B2-202ENST00000524475 KIF22Q14807 665 aa17.83■□□□□ 0.44
SF3B2-202ENST00000524475 CD99L2Q8TCZ2 262 aa17.83■□□□□ 0.44
SF3B2-202ENST00000524475 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.44
SF3B2-202ENST00000524475 HOXC10Q9NYD6 342 aa17.83■□□□□ 0.44
SF3B2-202ENST00000524475 SPDYE16A6NNV3 312 aaPredicted RBP17.82■□□□□ 0.44
SF3B2-202ENST00000524475 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
SF3B2-202ENST00000524475 NDUFB10O96000 172 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 NECTIN1Q15223 517 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 DGKHQ86XP1 1220 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 MB21D1Q8N884 522 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 GMCL1Q96IK5 515 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 STX8Q9UNK0 236 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 RABGAP1Q9Y3P9 1069 aa17.82■□□□□ 0.44
SF3B2-202ENST00000524475 B4E1Z4 1266 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 KDM4AO75164 1064 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
SF3B2-202ENST00000524475 PRMT2P55345 433 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 TRDNQ13061 729 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 RCSD1Q6JBY9 416 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 OTOP1Q7RTM1 612 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 SPICE1Q8N0Z3 855 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 ANKRD13CQ8N6S4 541 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 ANKS1AQ92625 1134 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 TANGO6Q9C0B7 1094 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 EFCC1Q9HA90 598 aa17.81■□□□□ 0.44
SF3B2-202ENST00000524475 NMT2O60551 498 aa17.8■□□□□ 0.44
SF3B2-202ENST00000524475 DSG3P32926 999 aa17.8■□□□□ 0.44
SF3B2-202ENST00000524475 CAP1Q01518 475 aa17.8■□□□□ 0.44
SF3B2-202ENST00000524475 LRRC47Q8N1G4 583 aaKnown RBP17.8■□□□□ 0.44
SF3B2-202ENST00000524475 NKX2-3Q8TAU0 364 aa17.8■□□□□ 0.44
SF3B2-202ENST00000524475 ZSWIM5Q9P217 1185 aa17.8■□□□□ 0.44
SF3B2-202ENST00000524475 RBPJLQ9UBG7 517 aa17.8■□□□□ 0.44
SF3B2-202ENST00000524475 ADAMTS5Q9UNA0 930 aa17.8■□□□□ 0.44
SF3B2-202ENST00000524475 ZSWIM8A7E2V4 1837 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 E7EWF7 191 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 PLA2G6O60733 806 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 FLOT1O75955 427 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 FCGRTP55899 365 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 ERVK-9P63128 1117 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 ERVK-24P63145 666 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 SLFN13Q68D06 897 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 FBXO46Q6PJ61 603 aaPredicted RBP17.79■□□□□ 0.44
SF3B2-202ENST00000524475 POTEEQ6S8J3 1075 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 GPRC5AQ8NFJ5 357 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
SF3B2-202ENST00000524475 MCOLN1Q9GZU1 580 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms