RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 TEKT1Q969V4 418 aa29.71■■■□□ 2.35
COL13A1-214ENST00000522165 USP40Q9NVE5 1235 aa29.71■■■□□ 2.35
COL13A1-214ENST00000522165 ATP2B1P20020 1258 aa29.7■■■□□ 2.35
COL13A1-214ENST00000522165 MSNP26038 577 aaKnown RBP29.7■■■□□ 2.35
COL13A1-214ENST00000522165 PIBF1Q8WXW3 757 aa29.7■■■□□ 2.35
COL13A1-214ENST00000522165 KCNQ5Q9NR82 932 aa29.7■■■□□ 2.35
COL13A1-214ENST00000522165 TRIM75PA6NK02 468 aa29.7■■■□□ 2.34
COL13A1-214ENST00000522165 GABPAQ06546 454 aa29.7■■■□□ 2.34
COL13A1-214ENST00000522165 ZKSCAN5Q9Y2L8 839 aa29.7■■■□□ 2.34
COL13A1-214ENST00000522165 A0A087WWV3 80 aa29.69■■■□□ 2.34
COL13A1-214ENST00000522165 PALM3A6NDB9 673 aaPredicted RBP29.69■■■□□ 2.34
COL13A1-214ENST00000522165 SRPRBQ9Y5M8 271 aaKnown RBP29.69■■■□□ 2.34
COL13A1-214ENST00000522165 ADAMTSL1Q8N6G6 1762 aa29.69■■■□□ 2.34
COL13A1-214ENST00000522165 NOVP48745 357 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 NLRP5P59047 1200 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 APOBEC3HQ6NTF7 200 aaKnown RBP29.68■■■□□ 2.34
COL13A1-214ENST00000522165 CDC42EP5Q6NZY7 148 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 ZNF579Q8NAF0 562 aaKnown RBP29.68■■■□□ 2.34
COL13A1-214ENST00000522165 C7orf43Q8WVR3 580 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 SH3GLB2Q9NR46 395 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 ZNF219Q9P2Y4 722 aaPredicted RBP29.68■■■□□ 2.34
COL13A1-214ENST00000522165 KCNH3Q9ULD8 1083 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 FKBP1AP62942 108 aaKnown RBP29.68■■■□□ 2.34
COL13A1-214ENST00000522165 SLC35G1Q2M3R5 365 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 CEP95Q96GE4 821 aa29.68■■■□□ 2.34
COL13A1-214ENST00000522165 GRIN1Q05586 938 aa29.67■■■□□ 2.34
COL13A1-214ENST00000522165 STRIP1Q5VSL9 837 aa29.67■■■□□ 2.34
COL13A1-214ENST00000522165 LZTS2Q9BRK4 669 aa29.67■■■□□ 2.34
COL13A1-214ENST00000522165 PLIN4Q96Q06 1357 aa29.67■■■□□ 2.34
COL13A1-214ENST00000522165 ECE2O60344 883 aa29.67■■■□□ 2.34
COL13A1-214ENST00000522165 NOM1Q5C9Z4 860 aaKnown RBP29.67■■■□□ 2.34
COL13A1-214ENST00000522165 CEP57L1Q8IYX8 460 aa29.67■■■□□ 2.34
COL13A1-214ENST00000522165 TOP1P11387 765 aaKnown RBP29.66■■■□□ 2.34
COL13A1-214ENST00000522165 CRKP46108 304 aa29.66■■■□□ 2.34
COL13A1-214ENST00000522165 CYTH3O43739 400 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 CALML3P27482 149 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 MRIQ9BWK5 157 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 OSBPL5Q9H0X9 879 aaPredicted RBP29.65■■■□□ 2.34
COL13A1-214ENST00000522165 MTMR7Q9Y216 660 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 SPECC1Q5M775 1068 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 DACT2Q5SW24 774 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 ZDHHC15Q96MV8 337 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 NAT10Q9H0A0 1025 aaKnown RBP29.65■■■□□ 2.34
COL13A1-214ENST00000522165 FAM13BQ9NYF5 915 aa29.65■■■□□ 2.34
COL13A1-214ENST00000522165 SCN9AQ15858 1988 aa29.64■■■□□ 2.34
COL13A1-214ENST00000522165 BMP15O95972 392 aa29.64■■■□□ 2.34
COL13A1-214ENST00000522165 ZRSR1Q15695 479 aaKnown RBP29.64■■■□□ 2.34
COL13A1-214ENST00000522165 GOLGA6L19H0YKK7 550 aa29.64■■■□□ 2.33
COL13A1-214ENST00000522165 LONRF3Q496Y0 759 aa29.64■■■□□ 2.33
COL13A1-214ENST00000522165 KRBA2Q6ZNG9 492 aa29.64■■■□□ 2.33
COL13A1-214ENST00000522165 DHX40Q8IX18 779 aaKnown RBP29.64■■■□□ 2.33
COL13A1-214ENST00000522165 GPKOWQ92917 476 aaPredicted RBP eCLIP29.64■■■□□ 2.33
COL13A1-214ENST00000522165 KLRF2D3W0D1 207 aa29.63■■■□□ 2.33
COL13A1-214ENST00000522165 WNT7AO00755 349 aa29.63■■■□□ 2.33
COL13A1-214ENST00000522165 SPZ1Q9BXG8 430 aa29.63■■■□□ 2.33
COL13A1-214ENST00000522165 SWAP70Q9UH65 585 aa29.63■■■□□ 2.33
COL13A1-214ENST00000522165 SERPINB13Q9UIV8 391 aa29.63■■■□□ 2.33
COL13A1-214ENST00000522165 TUBE1Q9UJT0 475 aa29.63■■■□□ 2.33
COL13A1-214ENST00000522165 ZNF646O15015 1829 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-214ENST00000522165 PARP1P09874 1014 aaKnown RBP29.62■■■□□ 2.33
COL13A1-214ENST00000522165 GOLGA8HP0CJ92 632 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 NLRP12P59046 1061 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 TTC38Q5R3I4 469 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 RASGRP2Q7LDG7 609 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 ELOA2Q8IYF1 753 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-214ENST00000522165 ADAMTS3O15072 1205 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 TRAPPC10P48553 1259 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 DPCR1Q3MIW9 517 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 CC2D2BQ6DHV5 1058 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 KIAA0825Q8IV33 1275 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 CSRNP2Q9H175 543 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.62■■■□□ 2.33
COL13A1-214ENST00000522165 MYO3BQ8WXR4 1341 aa29.62■■■□□ 2.33
COL13A1-214ENST00000522165 HDLBPQ00341 1268 aaKnown RBP29.61■■■□□ 2.33
COL13A1-214ENST00000522165 PIK3AP1Q6ZUJ8 805 aa29.61■■■□□ 2.33
COL13A1-214ENST00000522165 PLA2G4DQ86XP0 818 aa29.61■■■□□ 2.33
COL13A1-214ENST00000522165 BLIDQ8IZY5 108 aa29.61■■■□□ 2.33
COL13A1-214ENST00000522165 CNNM3Q8NE01 707 aa29.61■■■□□ 2.33
COL13A1-214ENST00000522165 MTMR4Q9NYA4 1195 aa29.61■■■□□ 2.33
COL13A1-214ENST00000522165 PCDHA4Q9UN74 947 aa29.61■■■□□ 2.33
COL13A1-214ENST00000522165 IGKV6D-41A0A0C4DH26 115 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 BECN2A8MW95 431 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 AKR1B1P15121 316 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 AOC3Q16853 763 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 WWC2Q6AWC2 1192 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 TYW1BQ6NUM6 668 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 METTL16Q86W50 562 aaKnown RBP29.6■■■□□ 2.33
COL13A1-214ENST00000522165 BPIFA3Q9BQP9 254 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 BIN1O00499 593 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 ZNF75DP51815 510 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 KIAA2012Q0VF49 1180 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 NFIAQ12857 509 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 ZNF174Q15697 407 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 TRIM5Q9C035 493 aa29.6■■■□□ 2.33
COL13A1-214ENST00000522165 PNOCQ13519 176 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 USP17L2Q6R6M4 530 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 SARM1Q6SZW1 724 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 FERMT2Q96AC1 680 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 PDGFDQ9GZP0 370 aaPredicted RBP29.59■■■□□ 2.33
COL13A1-214ENST00000522165 BARHL2Q9NY43 387 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms